Detailed information NTG0292740

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: DKG76_RS12960
• Genome accession: NZ_CP029465
• Coordinates: 2637935..2638366 (-)
• Length: 143 a.a.
• NCBI ID: WP_003236956.1
• Uniprot ID: A0A9W5PDS8
• Organism: Bacillus inaquosorum strain KCTC 13429
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2632935..2643366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKG76_RS12910 (DKG76_12910)	sinI	2633130..2633303 (+)	174	WP_003226347.1	anti-repressor SinI family protein	Regulator
DKG76_RS12915 (DKG76_12915)	sinR	2633337..2633672 (+)	336	WP_003226345.1	transcriptional regulator SinR	Regulator
DKG76_RS12920 (DKG76_12920)	tasA	2633766..2634551 (-)	786	WP_003236939.1	biofilm matrix protein TasA	-
DKG76_RS12925 (DKG76_12925)	-	2634615..2635187 (-)	573	WP_003236942.1	signal peptidase I	-
DKG76_RS12930 (DKG76_12930)	tapA	2635171..2635935 (-)	765	WP_003236944.1	amyloid fiber anchoring/assembly protein TapA	-
DKG76_RS12935 (DKG76_12935)	-	2636208..2636531 (+)	324	WP_003236947.1	YqzG/YhdC family protein	-
DKG76_RS12940 (DKG76_12940)	-	2636573..2636752 (-)	180	WP_003236949.1	YqzE family protein	-
DKG76_RS12945 (DKG76_12945)	comGG	2636823..2637197 (-)	375	WP_003236951.1	competence type IV pilus minor pilin ComGG	Machinery gene
DKG76_RS12950 (DKG76_12950)	comGF	2637198..2637581 (-)	384	WP_032731882.1	competence type IV pilus minor pilin ComGF	Machinery gene
DKG76_RS12955 (DKG76_12955)	comGE	2637607..2637951 (-)	345	WP_003236954.1	competence type IV pilus minor pilin ComGE	Machinery gene
DKG76_RS12960 (DKG76_12960)	comGD	2637935..2638366 (-)	432	WP_003236956.1	competence type IV pilus minor pilin ComGD	Machinery gene
DKG76_RS12965 (DKG76_12965)	comGC	2638356..2638652 (-)	297	WP_003236957.1	comG operon protein ComGC	Machinery gene
DKG76_RS12970 (DKG76_12970)	comGB	2638666..2639703 (-)	1038	WP_003236959.1	competence type IV pilus assembly protein ComGB	Machinery gene
DKG76_RS12975 (DKG76_12975)	comGA	2639690..2640760 (-)	1071	WP_003236962.1	competence protein ComGA	Machinery gene
DKG76_RS12980 (DKG76_12980)	-	2640723..2640953 (-)	231	WP_032731884.1	hypothetical protein	-
DKG76_RS12985 (DKG76_12985)	-	2640976..2641386 (-)	411	WP_003236965.1	CBS domain-containing protein	-
DKG76_RS12990 (DKG76_12990)	corA	2641449..2642393 (-)	945	WP_003236968.1	magnesium transporter CorA	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 16011.54 Da
• Isoelectric Point: 8.4188

>NTDB_id=292740 DKG76_RS12960 WP_003236956.1 2637935..2638366(-) (comGD) [Bacillus inaquosorum strain KCTC 13429]
MNIKLNEEEGFTLLESLLVLSLASILLIAVFTTLPPAYDNTAVRQAAWQLKNDIMLAQQTAISSHQRTKILFQKKEYQLV
MGDIVIERPYTTGLSIEPLTLKDRLEFNEKGHPNAGGKIQVKGHAAYDITVYLGSGRVNVERK

Nucleotide

• Length: 432 bp

>NTDB_id=292740 DKG76_RS12960 WP_003236956.1 2637935..2638366(-) (comGD) [Bacillus inaquosorum strain KCTC 13429]
TTGAACATTAAATTAAACGAGGAGGAGGGATTTACCCTTTTAGAAAGCTTACTTGTGTTAAGTCTAGCCTCTATCCTCTT
GATTGCCGTGTTTACCACACTTCCTCCTGCTTATGACAATACAGCTGTCCGTCAGGCGGCTTGGCAGCTGAAAAACGATA
TTATGCTTGCACAGCAGACTGCTATTTCCAGTCATCAAAGAACAAAAATTCTCTTTCAGAAAAAAGAATATCAATTAGTC
ATGGGTGATATTGTGATTGAACGTCCGTATACAACGGGACTTTCTATAGAACCGCTGACATTAAAAGACCGTTTGGAATT
TAACGAGAAAGGGCACCCGAATGCAGGCGGAAAAATACAAGTAAAAGGACATGCCGCTTATGACATCACAGTTTATTTAG
GGAGCGGGAGAGTCAATGTGGAGAGAAAGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	90.909	100	0.909