Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | DKG76_RS12970 | Genome accession | NZ_CP029465 |
| Coordinates | 2638666..2639703 (-) | Length | 345 a.a. |
| NCBI ID | WP_003236959.1 | Uniprot ID | A0A9W5PDK4 |
| Organism | Bacillus inaquosorum strain KCTC 13429 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2633666..2644703
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKG76_RS12920 (DKG76_12920) | tasA | 2633766..2634551 (-) | 786 | WP_003236939.1 | biofilm matrix protein TasA | - |
| DKG76_RS12925 (DKG76_12925) | - | 2634615..2635187 (-) | 573 | WP_003236942.1 | signal peptidase I | - |
| DKG76_RS12930 (DKG76_12930) | tapA | 2635171..2635935 (-) | 765 | WP_003236944.1 | amyloid fiber anchoring/assembly protein TapA | - |
| DKG76_RS12935 (DKG76_12935) | - | 2636208..2636531 (+) | 324 | WP_003236947.1 | YqzG/YhdC family protein | - |
| DKG76_RS12940 (DKG76_12940) | - | 2636573..2636752 (-) | 180 | WP_003236949.1 | YqzE family protein | - |
| DKG76_RS12945 (DKG76_12945) | comGG | 2636823..2637197 (-) | 375 | WP_003236951.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DKG76_RS12950 (DKG76_12950) | comGF | 2637198..2637581 (-) | 384 | WP_032731882.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DKG76_RS12955 (DKG76_12955) | comGE | 2637607..2637951 (-) | 345 | WP_003236954.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DKG76_RS12960 (DKG76_12960) | comGD | 2637935..2638366 (-) | 432 | WP_003236956.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DKG76_RS12965 (DKG76_12965) | comGC | 2638356..2638652 (-) | 297 | WP_003236957.1 | comG operon protein ComGC | Machinery gene |
| DKG76_RS12970 (DKG76_12970) | comGB | 2638666..2639703 (-) | 1038 | WP_003236959.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DKG76_RS12975 (DKG76_12975) | comGA | 2639690..2640760 (-) | 1071 | WP_003236962.1 | competence protein ComGA | Machinery gene |
| DKG76_RS12980 (DKG76_12980) | - | 2640723..2640953 (-) | 231 | WP_032731884.1 | hypothetical protein | - |
| DKG76_RS12985 (DKG76_12985) | - | 2640976..2641386 (-) | 411 | WP_003236965.1 | CBS domain-containing protein | - |
| DKG76_RS12990 (DKG76_12990) | corA | 2641449..2642393 (-) | 945 | WP_003236968.1 | magnesium transporter CorA | - |
| DKG76_RS12995 (DKG76_12995) | - | 2642536..2643864 (+) | 1329 | WP_003236970.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39741.03 Da Isoelectric Point: 9.4133
>NTDB_id=292742 DKG76_RS12970 WP_003236959.1 2638666..2639703(-) (comGB) [Bacillus inaquosorum strain KCTC 13429]
MKQIRKTWPLKDQAQLLKRLGEMTAGGYTLLDGLRLMELQMTKRQAADLTDTVIRLREGAPFYQVLKSLSFHKEAIGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNIETSRSTDMLFAFF
QHIDLVIILVALFAAGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLKSGLSIYDSLSAFKHQT
FLPFYRCEAEQVIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWPLKDQAQLLKRLGEMTAGGYTLLDGLRLMELQMTKRQAADLTDTVIRLREGAPFYQVLKSLSFHKEAIGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNIETSRSTDMLFAFF
QHIDLVIILVALFAAGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLKSGLSIYDSLSAFKHQT
FLPFYRCEAEQVIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=292742 DKG76_RS12970 WP_003236959.1 2638666..2639703(-) (comGB) [Bacillus inaquosorum strain KCTC 13429]
ATGAAACAGATTAGGAAAACTTGGCCGTTAAAGGATCAAGCCCAGTTATTGAAGCGGCTCGGTGAAATGACGGCGGGCGG
GTATACCCTTCTGGATGGATTACGCCTGATGGAACTCCAGATGACTAAAAGGCAGGCGGCTGACTTGACTGACACAGTCA
TTCGTTTGAGGGAAGGGGCGCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCATAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAAAGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATAGAAACCTCACGTTCAACAGACATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTCTAGTGGCTCTTTTTGCAGCAGGTATCGGCCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCTAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAGCGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTAAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATACTTCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATCGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGGAAAACTTGGCCGTTAAAGGATCAAGCCCAGTTATTGAAGCGGCTCGGTGAAATGACGGCGGGCGG
GTATACCCTTCTGGATGGATTACGCCTGATGGAACTCCAGATGACTAAAAGGCAGGCGGCTGACTTGACTGACACAGTCA
TTCGTTTGAGGGAAGGGGCGCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCATAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAAAGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATAGAAACCTCACGTTCAACAGACATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTCTAGTGGCTCTTTTTGCAGCAGGTATCGGCCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCTAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAGCGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTAAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATACTTCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATCGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
93.189 |
93.623 |
0.872 |