Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   DEH83_RS06305 Genome accession   NZ_CP029207
Coordinates   1243792..1245768 (+) Length   658 a.a.
NCBI ID   WP_003070579.1    Uniprot ID   A0A7G9AZL2
Organism   Streptococcus constellatus strain TCV107     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1238792..1250768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS06285 (DEH83_06285) tig 1238820..1240103 (+) 1284 WP_037597966.1 trigger factor -
  DEH83_RS06290 (DEH83_06295) rpoE 1240339..1240926 (+) 588 WP_003070583.1 DNA-directed RNA polymerase subunit delta -
  DEH83_RS06295 (DEH83_06300) - 1241170..1242780 (+) 1611 WP_255776418.1 CTP synthase -
  DEH83_RS06300 (DEH83_06305) - 1242943..1243632 (+) 690 WP_255776419.1 B3/4 domain-containing protein -
  DEH83_RS06305 (DEH83_06310) amiA3 1243792..1245768 (+) 1977 WP_003070579.1 peptide ABC transporter substrate-binding protein Regulator
  DEH83_RS06310 (DEH83_06315) amiA3 1245964..1247943 (+) 1980 WP_020998025.1 peptide ABC transporter substrate-binding protein Regulator
  DEH83_RS06315 (DEH83_06320) amiC 1248307..1249803 (+) 1497 WP_003070574.1 ABC transporter permease Regulator
  DEH83_RS06320 (DEH83_06325) amiD 1249803..1250729 (+) 927 WP_003070571.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 658 a.a.        Molecular weight: 72338.89 Da        Isoelectric Point: 8.5876

>NTDB_id=291197 DEH83_RS06305 WP_003070579.1 1243792..1245768(+) (amiA3) [Streptococcus constellatus strain TCV107]
MKKSKIIAVAGVALLTAGFLTACSGSKSNSAETKFGYVYSGDPETLDYVTSGKATTSDLVTNGVDGLLENDKYGNLVPSM
AKSWTVSKDGLTYTYKLRKGAKWYTSEGEEYAEVKAQDFVTGLKHAADKKSEALYLVQNSIKGLDAYVNGQTKDFSTVGV
KAVDDYTVQYTLNKPEPYWNSKTTSAIMWPINAEFLKSKGNKFGQSTDPNSILYNGPFLMKAITAKSAVEYVKNKHYWDK
DKVKVDSIKLAYYDGQDQDSLARNFKDGAYSYARLFPTSSNFATFEKQFKDNIYTAEAGSGTAALALNIDRQSYNHTAKK
TDEEKNSTKKALLNKDFRQALNFALDRESYAAQVNGKDGAATAIRNMFVPSNFVQVGEKSFSDVVEEKLASYGDDWKGVK
LADSQNGLYNPTKAKAKFAKAKEALQAQGVKFPIHLDVPVVETSKNYVARMQSLKQSVEKVLGKENVVMDLNMMSEDDFN
NVTYYAPNAAGEDWDISGAVGWSPDYQDPSTYLDILKSTASDNTKTWFGFDSGSENAGAKAVGLDEYNKLVDEAGAETTD
IAKRYEKYAAAQAWLTDSSLVLPTMASTGAGTFVSRIQPFSGAFAQTGSKGSSTYYKYIKVGKDAVTKKDYEAAKKKWQK
EKAESNKKAQDELADHVK

Nucleotide


Download         Length: 1977 bp        

>NTDB_id=291197 DEH83_RS06305 WP_003070579.1 1243792..1245768(+) (amiA3) [Streptococcus constellatus strain TCV107]
ATGAAAAAAAGTAAAATTATTGCAGTAGCAGGGGTAGCCCTACTAACTGCTGGTTTTTTAACAGCTTGCTCGGGTTCGAA
ATCAAACTCGGCTGAAACAAAATTTGGTTATGTGTATTCTGGTGATCCAGAAACTTTGGATTATGTAACGTCAGGAAAAG
CAACCACTAGCGATCTTGTGACAAATGGAGTTGACGGATTGTTAGAAAATGACAAATATGGAAATCTTGTACCATCAATG
GCTAAGTCATGGACTGTATCAAAAGATGGTTTAACCTATACTTATAAACTTCGTAAGGGTGCCAAATGGTACACATCAGA
AGGTGAAGAATATGCTGAAGTCAAGGCGCAAGATTTTGTAACTGGACTGAAACATGCTGCCGATAAAAAATCTGAGGCTC
TTTATTTGGTTCAAAACTCAATTAAAGGTTTAGATGCTTACGTGAATGGTCAAACAAAAGACTTTTCAACGGTAGGTGTG
AAAGCGGTTGATGACTATACTGTTCAGTATACATTGAACAAGCCAGAACCATATTGGAATTCTAAGACAACCTCTGCCAT
TATGTGGCCAATTAATGCCGAATTTTTGAAATCTAAAGGAAATAAATTTGGCCAATCAACAGACCCTAACTCAATCCTTT
ATAATGGACCATTCTTGATGAAAGCTATCACAGCAAAATCTGCGGTAGAATATGTTAAAAACAAACATTATTGGGATAAA
GATAAAGTAAAAGTTGATAGCATTAAACTTGCTTACTATGATGGTCAAGACCAGGACTCATTGGCTCGTAATTTCAAAGA
TGGGGCATACTCATACGCACGCCTCTTCCCAACAAGTTCAAACTTTGCAACTTTTGAAAAACAATTCAAGGACAATATCT
ATACAGCAGAAGCAGGCTCTGGAACGGCTGCTTTAGCCCTTAATATTGACCGTCAATCTTACAACCATACGGCTAAGAAA
ACAGATGAAGAAAAAAATTCAACGAAAAAGGCATTGTTGAACAAAGACTTCCGTCAAGCTTTGAACTTTGCACTTGACCG
CGAATCTTATGCAGCACAAGTAAATGGTAAAGATGGTGCTGCCACAGCAATCCGTAATATGTTTGTACCATCTAATTTTG
TTCAAGTTGGTGAAAAATCATTTAGTGATGTTGTAGAAGAAAAATTAGCAAGCTATGGCGATGACTGGAAGGGTGTCAAA
CTAGCTGATTCACAAAATGGCTTGTACAATCCAACAAAAGCAAAAGCAAAATTTGCAAAAGCAAAAGAAGCTTTGCAAGC
TCAAGGTGTGAAATTCCCAATCCACTTAGACGTTCCTGTTGTAGAAACTTCTAAGAACTACGTTGCTCGGATGCAGTCTT
TAAAACAATCTGTTGAAAAAGTACTCGGCAAAGAAAATGTTGTCATGGACTTGAATATGATGTCAGAAGACGACTTTAAT
AACGTCACTTACTATGCTCCAAATGCAGCTGGAGAAGACTGGGATATTTCAGGTGCTGTTGGTTGGAGTCCTGATTATCA
AGATCCATCTACTTATCTTGATATTTTGAAATCAACGGCTTCTGACAATACGAAGACTTGGTTTGGTTTTGACTCTGGTA
GTGAAAATGCCGGTGCTAAAGCAGTAGGCTTGGACGAATATAATAAATTAGTCGATGAAGCAGGTGCAGAAACAACAGAC
ATTGCAAAACGTTATGAAAAATATGCAGCAGCACAAGCTTGGTTGACAGATAGCTCGCTTGTCTTGCCAACAATGGCTTC
AACAGGTGCCGGAACTTTTGTGTCACGCATTCAACCGTTCTCAGGTGCATTTGCGCAAACAGGTAGTAAAGGTAGCTCAA
CCTATTATAAATACATTAAAGTCGGTAAAGATGCTGTCACGAAGAAAGACTATGAAGCAGCTAAGAAGAAATGGCAAAAA
GAAAAAGCCGAGTCTAATAAAAAAGCTCAAGATGAATTAGCTGATCATGTAAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9AZL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

64.036

100

0.641
  amiA3 Streptococcus thermophilus LMG 18311

63.885

100

0.64
  amiA Streptococcus salivarius strain HSISS4

62.918

100

0.629

Multiple sequence alignment