Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | C6571_RS08580 | Genome accession | NZ_CP027669 |
| Coordinates | 1840526..1841059 (+) | Length | 177 a.a. |
| NCBI ID | WP_106446317.1 | Uniprot ID | A0A2S0MZL8 |
| Organism | Simplicispira suum strain SC1-8 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1835526..1846059
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6571_RS08560 (C6571_08560) | - | 1835686..1836486 (+) | 801 | WP_106446313.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| C6571_RS08565 (C6571_08565) | - | 1836544..1837206 (+) | 663 | WP_106446314.1 | FHA domain-containing protein | - |
| C6571_RS08570 (C6571_08570) | - | 1837295..1839514 (+) | 2220 | WP_106446315.1 | CHASE2 domain-containing protein | - |
| C6571_RS08575 (C6571_08575) | - | 1839547..1840338 (+) | 792 | WP_106446316.1 | MBL fold metallo-hydrolase | - |
| C6571_RS08580 (C6571_08580) | pilE | 1840526..1841059 (+) | 534 | WP_106446317.1 | pilin | Machinery gene |
| C6571_RS08585 (C6571_08585) | - | 1841230..1841976 (+) | 747 | WP_211300715.1 | hypothetical protein | - |
| C6571_RS08590 (C6571_08590) | - | 1842065..1845109 (-) | 3045 | WP_106446319.1 | fused MFS/spermidine synthase | - |
Sequence
Protein
Download Length: 177 a.a. Molecular weight: 18176.87 Da Isoelectric Point: 9.3934
>NTDB_id=278856 C6571_RS08580 WP_106446317.1 1840526..1841059(+) (pilE) [Simplicispira suum strain SC1-8]
MKRLLQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEAVIAGSSVKSLMSEAFQTDGTVGLDAAAGAYNKTPAT
DPSKTSKYVKSIAVGAATPWTIAVAVKADGLNGIPTGLDGGTITFAPNVNGNTPVATSQGAIDWACASNTSVTATKRNLK
NVTLGTLQAKYAPSECR
MKRLLQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEAVIAGSSVKSLMSEAFQTDGTVGLDAAAGAYNKTPAT
DPSKTSKYVKSIAVGAATPWTIAVAVKADGLNGIPTGLDGGTITFAPNVNGNTPVATSQGAIDWACASNTSVTATKRNLK
NVTLGTLQAKYAPSECR
Nucleotide
Download Length: 534 bp
>NTDB_id=278856 C6571_RS08580 WP_106446317.1 1840526..1841059(+) (pilE) [Simplicispira suum strain SC1-8]
ATGAAGCGTCTTCTCCAGCAAGGTTTTACCTTGATCGAATTGATGATCGTTGTGGCGATCATCGGTATCTTGGCCGCCGT
GGCTCTGCCGGCGTATCAGGACTACACGGTGCGCGCCAAGGTGTCTGAAGCCGTAATTGCGGGTTCTTCCGTCAAGAGCC
TGATGAGCGAGGCTTTTCAAACGGACGGCACCGTCGGTCTTGATGCCGCTGCCGGCGCTTACAACAAAACGCCTGCAACT
GACCCCAGCAAGACTTCCAAGTATGTCAAGAGCATTGCCGTGGGCGCGGCTACCCCATGGACCATTGCAGTTGCCGTCAA
GGCCGATGGCCTGAACGGTATCCCCACGGGTTTGGACGGCGGCACCATCACGTTTGCTCCCAATGTCAATGGCAATACGC
CCGTTGCAACCTCGCAGGGTGCGATCGACTGGGCCTGCGCATCTAATACATCGGTGACTGCCACCAAGCGCAACCTGAAG
AACGTGACGCTCGGTACGCTCCAGGCGAAATACGCTCCTTCCGAGTGCCGTTGA
ATGAAGCGTCTTCTCCAGCAAGGTTTTACCTTGATCGAATTGATGATCGTTGTGGCGATCATCGGTATCTTGGCCGCCGT
GGCTCTGCCGGCGTATCAGGACTACACGGTGCGCGCCAAGGTGTCTGAAGCCGTAATTGCGGGTTCTTCCGTCAAGAGCC
TGATGAGCGAGGCTTTTCAAACGGACGGCACCGTCGGTCTTGATGCCGCTGCCGGCGCTTACAACAAAACGCCTGCAACT
GACCCCAGCAAGACTTCCAAGTATGTCAAGAGCATTGCCGTGGGCGCGGCTACCCCATGGACCATTGCAGTTGCCGTCAA
GGCCGATGGCCTGAACGGTATCCCCACGGGTTTGGACGGCGGCACCATCACGTTTGCTCCCAATGTCAATGGCAATACGC
CCGTTGCAACCTCGCAGGGTGCGATCGACTGGGCCTGCGCATCTAATACATCGGTGACTGCCACCAAGCGCAACCTGAAG
AACGTGACGCTCGGTACGCTCCAGGCGAAATACGCTCCTTCCGAGTGCCGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
61.497 |
100 |
0.65 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.805 |
98.305 |
0.401 |
| pilA2 | Legionella pneumophila str. Paris |
40.805 |
98.305 |
0.401 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.462 |
100 |
0.395 |
| comP | Acinetobacter baylyi ADP1 |
38.418 |
100 |
0.384 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.158 |
100 |
0.384 |