Detailed information NTG0276016

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: C6N19_RS02685
• Genome accession: NZ_CP027250
• Coordinates: 323134..324192 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain WCHAP100004
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 318134..329192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6N19_RS02670 (C6N19_02690)	-	319195..319527 (+)	333	WP_002116981.1	hypothetical protein	-
C6N19_RS02675 (C6N19_02695)	rrmA	319530..320354 (+)	825	WP_005078486.1	putative RNA methyltransferase	-
C6N19_RS02680 (C6N19_02700)	ponA	320411..322972 (-)	2562	WP_057066741.1	penicillin-binding protein PBP1a	-
C6N19_RS02685 (C6N19_02705)	pilM	323134..324192 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
C6N19_RS02690 (C6N19_02710)	pilN	324192..324833 (+)	642	WP_005078482.1	PilN domain-containing protein	Machinery gene
C6N19_RS02695 (C6N19_02715)	pilO	324830..325609 (+)	780	WP_005067082.1	type 4a pilus biogenesis protein PilO	Machinery gene
C6N19_RS02700 (C6N19_02720)	pilP	325621..326148 (+)	528	WP_005078479.1	pilus assembly protein PilP	Machinery gene
C6N19_RS02705 (C6N19_02725)	pilQ	326211..328337 (+)	2127	WP_005078477.1	type IV pilus secretin PilQ	Machinery gene
C6N19_RS02710 (C6N19_02730)	aroK	328349..328918 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=276016 C6N19_RS02685 WP_005067078.1 323134..324192(+) (pilM) [Acinetobacter pittii strain WCHAP100004]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=276016 C6N19_RS02685 WP_005067078.1 323134..324192(+) (pilM) [Acinetobacter pittii strain WCHAP100004]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCATACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGTGTAGAAGTATTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTATTGCAGCAGAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42