Detailed information NTG0276008

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: C6N18_RS18425
• Genome accession: NZ_CP027246
• Coordinates: 3602640..3603698 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain WCHAB005078
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3597640..3608698

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6N18_RS18400 (C6N18_18420)	aroK	3597928..3598497 (-)	570	WP_000643712.1	shikimate kinase AroK	-
C6N18_RS18405 (C6N18_18425)	pilQ	3598509..3600661 (-)	2153	Protein_3395	type IV pilus secretin PilQ	-
C6N18_RS18410 (C6N18_18430)	pilP	3600724..3601251 (-)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
C6N18_RS18415 (C6N18_18435)	pilO	3601262..3602002 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
C6N18_RS18420 (C6N18_18440)	pilN	3601999..3602640 (-)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
C6N18_RS18425 (C6N18_18445)	pilM	3602640..3603698 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
C6N18_RS18430 (C6N18_18450)	ponA	3603860..3606415 (+)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
C6N18_RS18435 (C6N18_18455)	-	3606433..3607257 (-)	825	WP_001990541.1	putative RNA methyltransferase	-
C6N18_RS18440 (C6N18_18460)	-	3607260..3607592 (-)	333	WP_000169598.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=276008 C6N18_RS18425 WP_002014066.1 3602640..3603698(-) (pilM) [Acinetobacter baumannii strain WCHAB005078]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=276008 C6N18_RS18425 WP_002014066.1 3602640..3603698(-) (pilM) [Acinetobacter baumannii strain WCHAB005078]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423