Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | C6N18_RS18410 | Genome accession | NZ_CP027246 |
| Coordinates | 3600724..3601251 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695059.1 | Uniprot ID | A0A0D5YDP9 |
| Organism | Acinetobacter baumannii strain WCHAB005078 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3595724..3606251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N18_RS18390 (C6N18_18410) | - | 3595926..3596801 (-) | 876 | WP_000218810.1 | hypothetical protein | - |
| C6N18_RS18395 (C6N18_18415) | aroB | 3596817..3597899 (-) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| C6N18_RS18400 (C6N18_18420) | aroK | 3597928..3598497 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| C6N18_RS18405 (C6N18_18425) | pilQ | 3598509..3600661 (-) | 2153 | Protein_3395 | type IV pilus secretin PilQ | - |
| C6N18_RS18410 (C6N18_18430) | pilP | 3600724..3601251 (-) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| C6N18_RS18415 (C6N18_18435) | pilO | 3601262..3602002 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C6N18_RS18420 (C6N18_18440) | pilN | 3601999..3602640 (-) | 642 | WP_000201229.1 | PilN domain-containing protein | Machinery gene |
| C6N18_RS18425 (C6N18_18445) | pilM | 3602640..3603698 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19371.59 Da Isoelectric Point: 9.0270
>NTDB_id=276005 C6N18_RS18410 WP_000695059.1 3600724..3601251(-) (pilP) [Acinetobacter baumannii strain WCHAB005078]
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=276005 C6N18_RS18410 WP_000695059.1 3600724..3601251(-) (pilP) [Acinetobacter baumannii strain WCHAB005078]
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.286 |
100 |
0.983 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |