Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | C0119_RS01780 | Genome accession | NZ_CP025618 |
| Coordinates | 379545..380018 (+) | Length | 157 a.a. |
| NCBI ID | WP_410169341.1 | Uniprot ID | - |
| Organism | Acinetobacter schindleri strain SGAir0122 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 374545..385018
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0119_RS01760 (C0119_05655) | - | 375515..376936 (+) | 1422 | WP_108675589.1 | FAD-dependent oxidoreductase | - |
| C0119_RS01765 (C0119_05650) | - | 377121..377711 (+) | 591 | WP_076754484.1 | LemA family protein | - |
| C0119_RS01770 (C0119_05645) | - | 377742..378782 (+) | 1041 | WP_108675588.1 | TPM domain-containing protein | - |
| C0119_RS01775 (C0119_05640) | - | 378776..379336 (+) | 561 | WP_108675587.1 | TPM domain-containing protein | - |
| C0119_RS01780 (C0119_05635) | pilA | 379545..380018 (+) | 474 | WP_410169341.1 | pilin | Machinery gene |
| C0119_RS01785 (C0119_05630) | tfpZ | 380075..380812 (+) | 738 | WP_108675585.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| C0119_RS01790 (C0119_05625) | - | 380904..382541 (+) | 1638 | WP_108675584.1 | PglL family O-oligosaccharyltransferase | - |
| C0119_RS01795 (C0119_05620) | bfr | 382598..383062 (-) | 465 | WP_108675583.1 | bacterioferritin | - |
| C0119_RS01800 (C0119_05615) | - | 383278..384339 (+) | 1062 | WP_108675582.1 | RNA-guided endonuclease InsQ/TnpB family protein | - |
| C0119_RS01805 (C0119_05610) | - | 384499..384693 (-) | 195 | WP_108675581.1 | bacterioferritin-associated ferredoxin | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 15863.26 Da Isoelectric Point: 8.9485
>NTDB_id=263045 C0119_RS01780 WP_410169341.1 379545..380018(+) (pilA) [Acinetobacter schindleri strain SGAir0122]
MQKGFTLIELMIVVAIIGILAAVAIPAYQDYTKRAKVTEGIALAAAAKTTVVENAASAARYDLGYSAPTATKDVKSVAIN
NANGQVTITYAAPVQNDGTIILRPYTGATTAPVALPASTAAYTPPATQINWACGAAGAAAPAVAGTLEAKLAPSNCR
MQKGFTLIELMIVVAIIGILAAVAIPAYQDYTKRAKVTEGIALAAAAKTTVVENAASAARYDLGYSAPTATKDVKSVAIN
NANGQVTITYAAPVQNDGTIILRPYTGATTAPVALPASTAAYTPPATQINWACGAAGAAAPAVAGTLEAKLAPSNCR
Nucleotide
Download Length: 474 bp
>NTDB_id=263045 C0119_RS01780 WP_410169341.1 379545..380018(+) (pilA) [Acinetobacter schindleri strain SGAir0122]
ATGCAAAAGGGTTTTACCCTTATTGAATTAATGATTGTTGTGGCGATCATTGGTATTTTGGCTGCAGTGGCGATTCCTGC
TTATCAAGATTATACAAAACGAGCAAAAGTTACAGAAGGTATAGCTTTGGCTGCAGCTGCAAAAACTACGGTTGTTGAAA
ATGCTGCCAGTGCCGCTAGATATGATCTAGGTTATTCAGCTCCAACGGCAACAAAAGATGTAAAATCTGTAGCTATTAAT
AATGCTAATGGACAAGTAACTATTACTTATGCTGCTCCTGTACAAAATGATGGTACTATTATTTTACGTCCGTATACAGG
CGCAACAACAGCTCCAGTTGCCCTACCAGCTTCAACAGCGGCTTATACACCACCTGCAACTCAAATTAATTGGGCATGCG
GTGCAGCAGGTGCAGCAGCTCCAGCAGTGGCAGGTACTTTAGAGGCTAAATTAGCTCCATCAAATTGTCGTTAA
ATGCAAAAGGGTTTTACCCTTATTGAATTAATGATTGTTGTGGCGATCATTGGTATTTTGGCTGCAGTGGCGATTCCTGC
TTATCAAGATTATACAAAACGAGCAAAAGTTACAGAAGGTATAGCTTTGGCTGCAGCTGCAAAAACTACGGTTGTTGAAA
ATGCTGCCAGTGCCGCTAGATATGATCTAGGTTATTCAGCTCCAACGGCAACAAAAGATGTAAAATCTGTAGCTATTAAT
AATGCTAATGGACAAGTAACTATTACTTATGCTGCTCCTGTACAAAATGATGGTACTATTATTTTACGTCCGTATACAGG
CGCAACAACAGCTCCAGTTGCCCTACCAGCTTCAACAGCGGCTTATACACCACCTGCAACTCAAATTAATTGGGCATGCG
GTGCAGCAGGTGCAGCAGCTCCAGCAGTGGCAGGTACTTTAGAGGCTAAATTAGCTCCATCAAATTGTCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
50.299 |
100 |
0.535 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.447 |
100 |
0.497 |
| pilA2 | Legionella pneumophila str. Paris |
47.826 |
100 |
0.49 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
37.949 |
100 |
0.471 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.667 |
100 |
0.446 |
| comP | Acinetobacter baylyi ADP1 |
39.873 |
100 |
0.401 |