Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   C0J00_RS10410 Genome accession   NZ_CP025536
Coordinates   2063462..2064610 (+) Length   382 a.a.
NCBI ID   WP_104968785.1    Uniprot ID   A0A2L0D730
Organism   Streptococcus pluranimalium strain TH11417     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2058462..2069610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS10390 (C0J00_10395) - 2059666..2062260 (+) 2595 WP_104968783.1 YfhO family protein -
  C0J00_RS10405 (C0J00_10410) rlmH 2062682..2063161 (-) 480 WP_104968784.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  C0J00_RS10410 (C0J00_10415) htrA 2063462..2064610 (+) 1149 WP_104968785.1 S1C family serine protease Regulator
  C0J00_RS10415 (C0J00_10420) spo0J 2064664..2065431 (+) 768 WP_104968786.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 40559.09 Da        Isoelectric Point: 4.3484

>NTDB_id=262376 C0J00_RS10410 WP_104968785.1 2063462..2064610(+) (htrA) [Streptococcus pluranimalium strain TH11417]
MAGAYLMLYFSNNLSTPLNNSQAKAKTSNVVYNNTTNTTKAAKKVQDAVVSVINYQKNTDSSLNDLYSQMFGGDNDKRSE
DDLSVYSEGSGVIYRKEGGSAYIVTNNHVIDGAENIEIMLADGTKVVGELVGSDTYSDLAVVKISDEKVSTVAEFADSDK
LNVGEVAIAMGSPLGSEYANSVTQGIVSSLSRTVTLKNEEGETISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKIS
STSTAREAVEGMGFAIPSNDVIKIINQLEKNGQVTRPALGISMANLSDLSTSAISELNIPNKLTGGIVVATVQDKMPASG
KLKQYDVITEIDGEEITSTSDLQSILYGHEIGDTIKITYYRGKDKQTTDIKLSKSTQDLENN

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=262376 C0J00_RS10410 WP_104968785.1 2063462..2064610(+) (htrA) [Streptococcus pluranimalium strain TH11417]
ATGGCAGGAGCTTATCTCATGCTCTATTTTTCCAATAACCTGTCAACTCCTTTGAATAATTCGCAAGCCAAAGCCAAAAC
AAGCAATGTGGTTTACAATAATACTACCAACACGACTAAAGCAGCCAAAAAAGTCCAAGATGCTGTTGTATCAGTTATTA
ACTACCAAAAGAATACCGATTCTTCTTTAAATGATCTTTATAGTCAAATGTTTGGTGGAGACAATGATAAGCGTTCTGAA
GATGATTTGAGTGTCTACAGCGAAGGCTCTGGCGTTATTTATCGAAAAGAAGGTGGATCAGCTTACATCGTCACTAACAA
TCACGTTATTGATGGAGCTGAAAATATTGAAATTATGCTTGCTGATGGAACAAAAGTCGTCGGAGAACTTGTTGGATCTG
ATACTTACTCCGATTTAGCTGTTGTCAAAATTTCTGATGAAAAAGTATCTACAGTTGCGGAGTTCGCAGACTCTGATAAA
TTAAACGTTGGAGAAGTAGCGATTGCAATGGGTAGCCCTCTAGGAAGTGAATATGCTAACTCTGTTACACAAGGAATTGT
GTCAAGTCTAAGCCGCACAGTAACGCTTAAAAATGAGGAGGGTGAAACCATTTCAACCAATGCTATCCAAACAGATGCTG
CCATCAACCCTGGCAACTCTGGTGGTGCTTTGATTAATATTGAAGGACAAGTTATTGGTATCAATTCAAGTAAAATCTCA
TCTACCTCAACTGCTCGCGAAGCCGTAGAAGGCATGGGATTTGCTATCCCATCTAATGATGTCATCAAAATTATCAATCA
GTTAGAAAAAAATGGACAAGTAACTCGCCCAGCACTAGGCATCTCTATGGCGAATCTTAGCGATCTCTCAACAAGTGCTA
TCTCAGAGCTTAATATTCCAAATAAGCTCACTGGAGGTATTGTTGTTGCCACTGTTCAAGATAAAATGCCTGCCTCAGGT
AAACTGAAACAATATGACGTCATCACTGAAATTGATGGTGAAGAAATAACATCAACCAGTGATTTACAAAGTATTCTTTA
TGGTCACGAAATTGGCGATACGATTAAAATCACCTATTATCGTGGTAAAGATAAACAAACCACTGACATTAAATTAAGCA
AGTCAACACAAGATTTAGAAAACAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2L0D730

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

67.112

97.906

0.657

  htrA Streptococcus pneumoniae Rx1

64.183

91.361

0.586

  htrA Streptococcus pneumoniae D39

64.183

91.361

0.586

  htrA Streptococcus pneumoniae R6

64.183

91.361

0.586

  htrA Streptococcus pneumoniae TIGR4

64.183

91.361

0.586

  htrA Streptococcus mitis NCTC 12261

64.183

91.361

0.586

  htrA Streptococcus gordonii str. Challis substr. CH1

58.839

99.215

0.584


Multiple sequence alignment