Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   C0J00_RS10415 Genome accession   NZ_CP025536
Coordinates   2064664..2065431 (+) Length   255 a.a.
NCBI ID   WP_104968786.1    Uniprot ID   A0A2L0D6Q9
Organism   Streptococcus pluranimalium strain TH11417     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2059664..2070431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS10390 (C0J00_10395) - 2059666..2062260 (+) 2595 WP_104968783.1 YfhO family protein -
  C0J00_RS10405 (C0J00_10410) rlmH 2062682..2063161 (-) 480 WP_104968784.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  C0J00_RS10410 (C0J00_10415) htrA 2063462..2064610 (+) 1149 WP_104968785.1 S1C family serine protease Regulator
  C0J00_RS10415 (C0J00_10420) spo0J 2064664..2065431 (+) 768 WP_104968786.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29339.60 Da        Isoelectric Point: 8.4256

>NTDB_id=262377 C0J00_RS10415 WP_104968786.1 2064664..2065431(+) (spo0J) [Streptococcus pluranimalium strain TH11417]
MEDILKDIQISDITTNPNQPRHHFNEEEIKELAESIANNGLIQPIIVRPSDIIGYELIAGERRLRAHQYLGKKSIKAVIT
DKSYQESMKQALIENLQRADLNPIEEAKAYQNILDKLELTHQELAISVGKSRPYISNQLRLLQLSKTWQNAIRKGVVMPG
HARLILNLSTKEQDIWLNDIISQQLSVHQLEQKLKQERHSPSSKEKVIFQDHLEKELQKSLGLEVSISGFQQKKGQLSIS
FANEEEFNRIINKLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=262377 C0J00_RS10415 WP_104968786.1 2064664..2065431(+) (spo0J) [Streptococcus pluranimalium strain TH11417]
ATGGAAGATATTTTAAAAGACATACAAATCAGTGATATTACAACAAATCCTAACCAACCTCGGCACCATTTCAATGAAGA
GGAGATTAAAGAACTTGCTGAATCAATAGCAAATAATGGACTGATCCAACCTATTATCGTTAGACCTTCTGATATTATTG
GATACGAACTAATTGCTGGAGAAAGGCGTCTAAGAGCTCATCAATATCTTGGCAAAAAATCTATTAAAGCTGTTATTACC
GATAAAAGTTATCAAGAAAGTATGAAGCAAGCTCTTATCGAAAATCTTCAAAGAGCTGACTTGAATCCCATTGAAGAAGC
TAAGGCTTACCAAAATATACTTGATAAATTAGAGCTCACCCACCAAGAATTAGCTATTAGTGTCGGAAAATCTCGTCCCT
ATATTTCTAATCAATTGCGCTTACTCCAACTTTCTAAAACTTGGCAAAATGCTATTCGAAAAGGGGTGGTTATGCCAGGC
CATGCACGACTGATTCTAAACCTCTCAACAAAAGAGCAAGACATCTGGCTAAATGATATTATTAGTCAACAATTAAGTGT
ACATCAATTAGAACAGAAATTAAAACAAGAGCGTCATTCGCCTTCTTCCAAAGAAAAAGTCATTTTTCAAGATCATCTCG
AAAAAGAACTGCAAAAATCACTTGGTTTAGAAGTTAGCATTTCAGGATTTCAGCAAAAAAAAGGACAACTATCGATTAGC
TTCGCAAATGAAGAAGAATTCAACAGAATTATCAACAAGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2L0D6Q9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.765

100

0.518


Multiple sequence alignment