Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   C0J00_RS01455 Genome accession   NZ_CP025536
Coordinates   280758..282257 (+) Length   499 a.a.
NCBI ID   WP_104967229.1    Uniprot ID   A0A2L0D235
Organism   Streptococcus pluranimalium strain TH11417     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 275758..287257
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS01445 (C0J00_01445) pbp3 277284..278513 (-) 1230 WP_104967227.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  C0J00_RS01450 (C0J00_01450) amiA 278719..280692 (+) 1974 WP_104967228.1 peptide ABC transporter substrate-binding protein Regulator
  C0J00_RS01455 (C0J00_01455) amiC 280758..282257 (+) 1500 WP_104967229.1 ABC transporter permease Regulator
  C0J00_RS01460 (C0J00_01460) amiD 282257..283183 (+) 927 WP_104967230.1 oligopeptide ABC transporter permease OppC Regulator
  C0J00_RS01465 (C0J00_01465) amiE 283192..284241 (+) 1050 WP_104967231.1 ABC transporter ATP-binding protein Regulator
  C0J00_RS01470 (C0J00_01470) amiF 284256..285185 (+) 930 WP_104967232.1 ATP-binding cassette domain-containing protein Regulator
  C0J00_RS01475 (C0J00_01475) - 285487..287148 (+) 1662 WP_104967233.1 peptide ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 499 a.a.        Molecular weight: 56065.13 Da        Isoelectric Point: 10.0377

>NTDB_id=262335 C0J00_RS01455 WP_104967229.1 280758..282257(+) (amiC) [Streptococcus pluranimalium strain TH11417]
MKKYILMRILRSLVSIFLVTTLVYTIVYTMVPKSLIFKNDPNYNKMITTPDKKSDYENTVFERMGYIDYMTSKELQEEAS
KEYKNVTTEPTKANKNTYQKFLSASSGKWQLHQFKESKEFYATRHISIFERVWKFYSNLIVIDHPWKIKDSSNPDLERYV
RFENDPAVGPALVGSGTQHKYLIYFNGSFPFVHQNIVKLNLGVSYPTYANQPVTRIITQGQGKTLQNEVIFPSGSTRNSA
INIYSRTYLSPSKADSQAKRNFGKDDAYTATQNNYSEPSMLKNSFIIGVIGVLIAYALGLPIGMLMSRYKDGWFDRLSTG
TMTFMLALPSVATIYIIRFLGGLVGLPDSFPILGASSPLSYVLPSLVLGILSVPGIVVWFRRYMVDQQASDYVRFARSKG
LSEAEISQKHLFKNAMVPISNGIPTSIAMTIVGATLTETIFAFPGMGKMLIDSVRAANNSMVVGLVFIFTVVSVFALLLG
DLLMTIFDPRIRLTSKGGK

Nucleotide


Download         Length: 1500 bp        

>NTDB_id=262335 C0J00_RS01455 WP_104967229.1 280758..282257(+) (amiC) [Streptococcus pluranimalium strain TH11417]
ATGAAAAAATATATCTTAATGCGTATTTTGCGATCATTAGTTTCTATTTTTTTGGTAACAACACTGGTTTATACAATTGT
CTATACCATGGTACCGAAGAGTTTGATTTTTAAAAATGATCCCAACTATAATAAAATGATTACCACTCCGGACAAAAAAT
CGGATTATGAAAATACGGTTTTTGAAAGGATGGGCTATATTGACTATATGACTTCTAAGGAACTTCAAGAAGAAGCTTCA
AAAGAATATAAAAATGTAACAACAGAGCCAACAAAAGCTAATAAAAATACGTATCAAAAGTTCTTATCAGCAAGTAGTGG
CAAGTGGCAATTGCACCAATTTAAGGAAAGTAAGGAATTTTACGCAACACGTCATATATCAATTTTTGAGCGTGTTTGGA
AGTTCTACTCAAATTTAATTGTGATTGATCATCCTTGGAAAATAAAAGATTCTTCGAACCCTGATTTGGAACGTTACGTT
CGTTTTGAAAATGATCCTGCTGTGGGTCCAGCTCTTGTTGGTTCAGGAACACAGCATAAGTATTTGATTTATTTTAATGG
TTCATTCCCATTTGTACATCAAAATATTGTTAAGCTCAATTTAGGAGTATCTTACCCAACCTATGCCAATCAGCCTGTTA
CTCGTATTATCACACAAGGACAGGGTAAAACGCTTCAAAATGAAGTCATTTTCCCAAGTGGTAGCACTCGAAACTCTGCC
ATCAATATCTATTCAAGAACTTATTTGTCACCTTCGAAAGCAGATTCTCAAGCCAAACGAAACTTTGGTAAAGATGATGC
GTACACAGCCACACAAAATAATTACAGTGAACCGTCAATGTTGAAGAACTCTTTCATTATCGGTGTCATCGGTGTCTTGA
TAGCTTATGCATTAGGTTTACCGATTGGTATGTTAATGTCTCGCTACAAAGATGGTTGGTTTGATAGACTATCAACCGGA
ACAATGACCTTTATGTTGGCTTTGCCAAGTGTTGCGACAATCTATATTATCCGCTTCTTGGGTGGTCTTGTTGGTTTGCC
AGATAGTTTCCCAATTTTAGGAGCATCTAGCCCGCTTTCCTATGTACTACCATCTCTTGTTTTGGGGATTTTAAGTGTTC
CAGGTATCGTGGTTTGGTTCCGTCGTTATATGGTCGATCAACAGGCTAGTGATTATGTTCGCTTTGCTCGATCAAAAGGA
CTTTCAGAAGCAGAAATTTCACAAAAACATTTATTTAAGAATGCTATGGTGCCCATTTCAAACGGTATTCCAACATCAAT
TGCCATGACGATTGTAGGTGCTACATTGACAGAGACTATTTTTGCCTTTCCTGGTATGGGTAAAATGTTGATTGACTCTG
TACGAGCTGCTAATAACTCAATGGTTGTCGGTTTAGTCTTTATCTTTACAGTTGTATCTGTTTTCGCTTTGTTACTAGGT
GATCTCTTGATGACTATTTTCGACCCACGTATTCGATTGACTTCAAAAGGAGGTAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(299-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0D235

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

62.124

100

0.621
  amiC Streptococcus thermophilus LMD-9

61.723

100

0.617
  amiC Streptococcus thermophilus LMG 18311

61.523

100

0.615

Multiple sequence alignment