Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   C0J00_RS01465 Genome accession   NZ_CP025536
Coordinates   283192..284241 (+) Length   349 a.a.
NCBI ID   WP_104967231.1    Uniprot ID   A0A2L0D2N2
Organism   Streptococcus pluranimalium strain TH11417     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 278192..289241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS01450 (C0J00_01450) amiA 278719..280692 (+) 1974 WP_104967228.1 peptide ABC transporter substrate-binding protein Regulator
  C0J00_RS01455 (C0J00_01455) amiC 280758..282257 (+) 1500 WP_104967229.1 ABC transporter permease Regulator
  C0J00_RS01460 (C0J00_01460) amiD 282257..283183 (+) 927 WP_104967230.1 oligopeptide ABC transporter permease OppC Regulator
  C0J00_RS01465 (C0J00_01465) amiE 283192..284241 (+) 1050 WP_104967231.1 ABC transporter ATP-binding protein Regulator
  C0J00_RS01470 (C0J00_01470) amiF 284256..285185 (+) 930 WP_104967232.1 ATP-binding cassette domain-containing protein Regulator
  C0J00_RS01475 (C0J00_01475) - 285487..287148 (+) 1662 WP_104967233.1 peptide ABC transporter substrate-binding protein -
  C0J00_RS01480 (C0J00_01480) - 287263..288177 (+) 915 WP_104967234.1 ABC transporter permease -
  C0J00_RS01485 (C0J00_01485) - 288188..289219 (+) 1032 WP_104967235.1 ABC transporter permease -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 38563.40 Da        Isoelectric Point: 5.6967

>NTDB_id=262337 C0J00_RS01465 WP_104967231.1 283192..284241(+) (amiE) [Streptococcus pluranimalium strain TH11417]
MKKTDNIILSVKDVVVEFDVRDRVLTAIRGVSLDLIEGEVLAVVGESGSGKSVLTKTFTGMLESNGRIASGSISYRGQEL
AGLKDHKEWAGIRGAKIATIFQDPMTSLDPIKSIGSQITEVIIKHQGKSKAEAKKMAISYMESVGIPEAEKRFKEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIKLLKDLQAEYSFTTIFITHDLGVVASIADKVAVMYAGDIVE
YGTVEDIFYDPRHPYTWSLLSSLPQLADETGVLFSIPGAPPSLYKPIKGDAFAPRSRYAMQIDFEEDAPKFAVTETHWAK
TWLLHPDAPKVEKPEAIQNLHEKISEKFN

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=262337 C0J00_RS01465 WP_104967231.1 283192..284241(+) (amiE) [Streptococcus pluranimalium strain TH11417]
ATGAAAAAAACAGATAATATTATTTTAAGTGTAAAAGATGTTGTTGTTGAATTCGATGTCCGTGACCGTGTTCTGACAGC
TATTCGAGGTGTTTCCCTTGATTTGATTGAAGGTGAAGTTCTAGCAGTCGTTGGGGAGTCAGGGTCTGGAAAATCGGTAT
TAACAAAGACTTTTACAGGAATGCTTGAAAGTAATGGTCGCATAGCCAGTGGTTCGATTTCTTATAGAGGACAAGAATTA
GCTGGATTAAAAGACCATAAAGAGTGGGCAGGGATTCGTGGGGCTAAGATTGCAACGATTTTCCAAGATCCAATGACTTC
CTTAGATCCAATTAAATCGATAGGAAGTCAGATAACAGAAGTTATCATCAAGCATCAAGGAAAATCTAAAGCAGAAGCTA
AAAAAATGGCGATTTCATATATGGAAAGTGTAGGTATTCCAGAAGCAGAGAAACGTTTCAAAGAGTATCCTTTCCAATAT
TCTGGAGGAATGCGACAACGTATCGTTATTGCTATTGCCCTTGCATGTCGACCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCCTTGGATGTTACCATTCAAGCTCAGATCATCAAATTGTTGAAAGATTTACAAGCAGAATATAGCTTTACAACGA
TCTTTATCACTCACGATTTGGGTGTTGTTGCAAGCATTGCCGATAAAGTTGCAGTGATGTATGCAGGTGATATTGTTGAA
TATGGAACGGTCGAAGATATTTTCTATGACCCACGCCATCCATACACATGGAGCTTGTTATCAAGCTTGCCACAGCTAGC
AGATGAAACGGGAGTGTTGTTTTCTATTCCAGGAGCGCCGCCATCATTATACAAACCTATAAAAGGCGATGCTTTTGCAC
CAAGATCACGCTATGCTATGCAAATTGATTTTGAAGAAGATGCGCCAAAATTTGCAGTTACAGAAACACACTGGGCAAAA
ACTTGGCTCTTGCATCCGGATGCACCAAAAGTTGAAAAACCAGAAGCTATTCAAAATCTACATGAAAAAATTTCAGAAAA
ATTCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2L0D2N2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

82.267

98.567

0.811

  amiE Streptococcus thermophilus LMG 18311

80.523

98.567

0.794

  amiE Streptococcus thermophilus LMD-9

80.523

98.567

0.794

  oppD Streptococcus mutans UA159

55.952

96.275

0.539


Multiple sequence alignment