Detailed information NTG0258091

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: CWI64_RS05850
• Genome accession: NZ_CP025076
• Coordinates: 1078901..1079362 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250534.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain BHN97x
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1073901..1084362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWI64_RS05820 (CWI64_05820)	-	1074198..1075022 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
CWI64_RS05825 (CWI64_05825)	rnpA	1074997..1075368 (-)	372	WP_000739246.1	ribonuclease P protein component	-
CWI64_RS12295	-	1075385..1075516 (-)	132	WP_000768904.1	hypothetical protein	-
CWI64_RS05830 (CWI64_05830)	-	1075517..1076707 (-)	1191	WP_000167766.1	acetate kinase	-
CWI64_RS05835 (CWI64_05835)	comYH	1076758..1077711 (-)	954	WP_000345133.1	class I SAM-dependent methyltransferase	Machinery gene
CWI64_RS05840 (CWI64_05840)	-	1077772..1078373 (-)	602	Protein_1078	methyltransferase domain-containing protein	-
CWI64_RS05845 (CWI64_05845)	comGG/cglG	1078510..1078923 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
CWI64_RS05850 (CWI64_05850)	comGF/cglF	1078901..1079362 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
CWI64_RS05855 (CWI64_05855)	comGE/cglE	1079325..1079627 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
CWI64_RS05860 (CWI64_05860)	comGD/cglD	1079590..1079994 (-)	405	WP_000588024.1	competence type IV pilus minor pilin ComGD	Machinery gene
CWI64_RS05865 (CWI64_05865)	comGC/cglC	1079987..1080313 (-)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
CWI64_RS05870 (CWI64_05870)	comGB/cglB	1080315..1081331 (-)	1017	WP_078132591.1	competence type IV pilus assembly protein ComGB	Machinery gene
CWI64_RS05875 (CWI64_05875)	comGA/cglA/cilD	1081279..1082220 (-)	942	WP_000249573.1	competence type IV pilus ATPase ComGA	Machinery gene
CWI64_RS05880 (CWI64_05880)	-	1082296..1082661 (-)	366	WP_000286415.1	DUF1033 family protein	-
CWI64_RS05885 (CWI64_05885)	-	1082812..1083870 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17972.67 Da
• Isoelectric Point: 9.6092

>NTDB_id=258091 CWI64_RS05850 WP_000250534.1 1078901..1079362(-) (comGF/cglF) [Streptococcus pneumoniae strain BHN97x]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEVELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSVRITEDNQLVRFHFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=258091 CWI64_RS05850 WP_000250534.1 1078901..1079362(-) (comGF/cglF) [Streptococcus pneumoniae strain BHN97x]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGTAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGATGATTTCCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGACTCAAATCTGTACGGATTACAGAGGACAATCAACTGGTTCGCTTTCATT
TCCAGTTCCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	100	100	1
comGF/cglF	Streptococcus pneumoniae D39	100	100	1
comGF/cglF	Streptococcus pneumoniae R6	100	100	1
comGF/cglF	Streptococcus pneumoniae TIGR4	100	100	1
comGF/cglF	Streptococcus mitis SK321	90.85	100	0.909
comGF/cglF	Streptococcus mitis NCTC 12261	89.542	100	0.895