Detailed information NTG0258093

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: CWI64_RS05860
• Genome accession: NZ_CP025076
• Coordinates: 1079590..1079994 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588024.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain BHN97x
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1074590..1084994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CWI64_RS05825 (CWI64_05825)	rnpA	1074997..1075368 (-)	372	WP_000739246.1	ribonuclease P protein component	-
CWI64_RS12295	-	1075385..1075516 (-)	132	WP_000768904.1	hypothetical protein	-
CWI64_RS05830 (CWI64_05830)	-	1075517..1076707 (-)	1191	WP_000167766.1	acetate kinase	-
CWI64_RS05835 (CWI64_05835)	comYH	1076758..1077711 (-)	954	WP_000345133.1	class I SAM-dependent methyltransferase	Machinery gene
CWI64_RS05840 (CWI64_05840)	-	1077772..1078373 (-)	602	Protein_1078	methyltransferase domain-containing protein	-
CWI64_RS05845 (CWI64_05845)	comGG/cglG	1078510..1078923 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
CWI64_RS05850 (CWI64_05850)	comGF/cglF	1078901..1079362 (-)	462	WP_000250534.1	competence type IV pilus minor pilin ComGF	Machinery gene
CWI64_RS05855 (CWI64_05855)	comGE/cglE	1079325..1079627 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
CWI64_RS05860 (CWI64_05860)	comGD/cglD	1079590..1079994 (-)	405	WP_000588024.1	competence type IV pilus minor pilin ComGD	Machinery gene
CWI64_RS05865 (CWI64_05865)	comGC/cglC	1079987..1080313 (-)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
CWI64_RS05870 (CWI64_05870)	comGB/cglB	1080315..1081331 (-)	1017	WP_078132591.1	competence type IV pilus assembly protein ComGB	Machinery gene
CWI64_RS05875 (CWI64_05875)	comGA/cglA/cilD	1081279..1082220 (-)	942	WP_000249573.1	competence type IV pilus ATPase ComGA	Machinery gene
CWI64_RS05880 (CWI64_05880)	-	1082296..1082661 (-)	366	WP_000286415.1	DUF1033 family protein	-
CWI64_RS05885 (CWI64_05885)	-	1082812..1083870 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14666.79 Da
• Isoelectric Point: 10.0319

>NTDB_id=258093 CWI64_RS05860 WP_000588024.1 1079590..1079994(-) (comGD/cglD) [Streptococcus pneumoniae strain BHN97x]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNSDGQTISNGSQKLPV
PKGIQAPSDQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=258093 CWI64_RS05860 WP_000588024.1 1079590..1079994(-) (comGD/cglD) [Streptococcus pneumoniae strain BHN97x]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTCAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGCCCCATCAGATCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comYD	Streptococcus gordonii str. Challis substr. CH1	59.843	94.776	0.567
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47