Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   CWI64_RS04805 Genome accession   NZ_CP025076
Coordinates   907026..908093 (-) Length   355 a.a.
NCBI ID   WP_000159556.1    Uniprot ID   A0A0B7LLF7
Organism   Streptococcus pneumoniae strain BHN97x     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 902026..913093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI64_RS04780 (CWI64_04780) treR 902197..902907 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  CWI64_RS04785 (CWI64_04785) - 902940..903743 (-) 804 WP_000157664.1 ATP-binding cassette domain-containing protein -
  CWI64_RS04790 (CWI64_04790) - 903756..904649 (-) 894 WP_001012090.1 ABC transporter permease -
  CWI64_RS04795 (CWI64_04795) - 904661..905598 (-) 938 Protein_909 ABC transporter substrate-binding protein -
  CWI64_RS04800 (CWI64_04800) amiF 906089..907015 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein Regulator
  CWI64_RS04805 (CWI64_04805) amiE 907026..908093 (-) 1068 WP_000159556.1 ABC transporter ATP-binding protein Regulator
  CWI64_RS04810 (CWI64_04810) amiD 908102..909028 (-) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator
  CWI64_RS04815 (CWI64_04815) amiC 909028..910524 (-) 1497 WP_000759905.1 ABC transporter permease Regulator
  CWI64_RS04820 (CWI64_04820) amiA3 910591..912570 (-) 1980 WP_000742234.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39504.11 Da        Isoelectric Point: 4.8764

>NTDB_id=258075 CWI64_RS04805 WP_000159556.1 907026..908093(-) (amiE) [Streptococcus pneumoniae strain BHN97x]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=258075 CWI64_RS04805 WP_000159556.1 907026..908093(-) (amiE) [Streptococcus pneumoniae strain BHN97x]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTCGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGTAAATCTGTTT
TGACAAAGACCTTCACAGGTATGCTCGAAGAAAATGGTCGTATTGCCCAAGGTAGTATTGACTACCGTGGTCAGGACTTG
ACAGCTTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACTATCTTCCAGGACCCAATGACTAG
TTTGGACCCCATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGCATTCCAGACGCAGATAGACGTTTTAATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCGATTGCCCTTGCCTGCCGACCTGATGTCTTGATCTGTGATGAGCCAAC
AACTGCCTTGGATGTAACTATTCAAGCTCAGATTATTGATTTGCTAAAATCTTTACAAAACGAGTATCATTTCACAACAA
TCTTTATTACCCACGACCTTGGTGTGGTGGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAG
TATGGAACGGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTATTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGAACTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCTTTTGCCT
TGCGTTCTGACTACGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTTCTTCATGAGGATGCTCCGAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATCCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LLF7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

88.451

100

0.885

  amiE Streptococcus thermophilus LMG 18311

86.479

100

0.865

  amiE Streptococcus thermophilus LMD-9

86.479

100

0.865

  oppD Streptococcus mutans UA159

54.545

99.155

0.541


Multiple sequence alignment