Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CG478_RS09830 Genome accession   NZ_CP024111
Coordinates   1869076..1869249 (-) Length   57 a.a.
NCBI ID   WP_011983978.1    Uniprot ID   A7GM66
Organism   Bacillus cytotoxicus strain CH_4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1864076..1874249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG478_RS09810 (CG478_009770) - 1864903..1865649 (-) 747 WP_011983982.1 YjbA family protein -
  CG478_RS09815 (CG478_009775) - 1865790..1866578 (-) 789 WP_011983981.1 DUF2268 domain-containing protein -
  CG478_RS09820 (CG478_009780) fabF 1866684..1867922 (-) 1239 WP_087094612.1 beta-ketoacyl-ACP synthase II -
  CG478_RS09825 (CG478_009785) - 1867953..1868885 (-) 933 WP_087094611.1 beta-ketoacyl-ACP synthase III -
  CG478_RS09830 (CG478_009790) comZ 1869076..1869249 (-) 174 WP_011983978.1 ComZ family protein Regulator
  CG478_RS09835 (CG478_009795) - 1869309..1870151 (-) 843 WP_087094610.1 NAD-dependent epimerase/dehydratase family protein -
  CG478_RS09840 (CG478_009800) - 1870210..1870944 (-) 735 WP_087094609.1 alpha/beta hydrolase -
  CG478_RS09845 (CG478_009805) - 1871101..1871283 (+) 183 WP_011983975.1 YjzD family protein -
  CG478_RS09850 (CG478_009810) clpC 1871314..1873914 (-) 2601 WP_011983974.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6553.74 Da        Isoelectric Point: 4.6653

>NTDB_id=252104 CG478_RS09830 WP_011983978.1 1869076..1869249(-) (comZ) [Bacillus cytotoxicus strain CH_4]
MNEKNMQFLQIAMKYLPEAKAILDDHGVALDMEKAQPVLELLMKVMNEAYELGKTEK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=252104 CG478_RS09830 WP_011983978.1 1869076..1869249(-) (comZ) [Bacillus cytotoxicus strain CH_4]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCAATGAAATATTTACCAGAGGCAAAAGCAATTTTAGATGATCATGG
AGTGGCACTTGATATGGAGAAAGCCCAGCCGGTATTAGAATTGTTAATGAAAGTGATGAATGAAGCATATGAACTAGGCA
AGACAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.182

96.491

0.561

Multiple sequence alignment