Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CG478_RS09850 | Genome accession | NZ_CP024111 |
| Coordinates | 1871314..1873914 (-) | Length | 866 a.a. |
| NCBI ID | WP_011983974.1 | Uniprot ID | A7GM62 |
| Organism | Bacillus cytotoxicus strain CH_4 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1866314..1878914
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG478_RS09820 (CG478_009780) | fabF | 1866684..1867922 (-) | 1239 | WP_087094612.1 | beta-ketoacyl-ACP synthase II | - |
| CG478_RS09825 (CG478_009785) | - | 1867953..1868885 (-) | 933 | WP_087094611.1 | beta-ketoacyl-ACP synthase III | - |
| CG478_RS09830 (CG478_009790) | comZ | 1869076..1869249 (-) | 174 | WP_011983978.1 | ComZ family protein | Regulator |
| CG478_RS09835 (CG478_009795) | - | 1869309..1870151 (-) | 843 | WP_087094610.1 | NAD-dependent epimerase/dehydratase family protein | - |
| CG478_RS09840 (CG478_009800) | - | 1870210..1870944 (-) | 735 | WP_087094609.1 | alpha/beta hydrolase | - |
| CG478_RS09845 (CG478_009805) | - | 1871101..1871283 (+) | 183 | WP_011983975.1 | YjzD family protein | - |
| CG478_RS09850 (CG478_009810) | clpC | 1871314..1873914 (-) | 2601 | WP_011983974.1 | ATP-dependent chaperone ClpB | Regulator |
| CG478_RS09855 (CG478_009815) | - | 1874073..1874252 (-) | 180 | WP_041809524.1 | YjzC family protein | - |
| CG478_RS09860 (CG478_009825) | - | 1874734..1875543 (+) | 810 | WP_011983972.1 | Cof-type HAD-IIB family hydrolase | - |
| CG478_RS09865 (CG478_009830) | - | 1875644..1875784 (+) | 141 | WP_011983971.1 | hypothetical protein | - |
| CG478_RS09870 (CG478_009835) | - | 1875785..1875982 (+) | 198 | WP_011983970.1 | DUF3813 domain-containing protein | - |
| CG478_RS09875 (CG478_009840) | - | 1876007..1876864 (-) | 858 | WP_087094607.1 | YitT family protein | - |
| CG478_RS09880 (CG478_009845) | - | 1876968..1877099 (+) | 132 | WP_011983968.1 | DUF3941 domain-containing protein | - |
| CG478_RS09885 (CG478_009850) | prsA | 1877225..1878082 (+) | 858 | WP_011983967.1 | peptidylprolyl isomerase PrsA | - |
Sequence
Protein
Download Length: 866 a.a. Molecular weight: 97645.90 Da Isoelectric Point: 5.2823
>NTDB_id=252105 CG478_RS09850 WP_011983974.1 1871314..1873914(-) (clpC) [Bacillus cytotoxicus strain CH_4]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE
AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQRVTSQNPEVT
YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE
KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT
VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLLALLKQQDGLAVRIFQKMNVNIEQLTKEVETLIQKKPSVTGSGIE
AGKLYITGALQQLLVKAEAEAKKLQDEYISVEHVLLAFCEETGDVNRLFSNFRITKDTLLQSLMAVRGNQRVTSQNPEVT
YEALEKYGRDLVAEVKQGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRALVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQHELSDLKEVASGMRAQWEKEKEEIHKVRNLRE
KLERLRRELEEAEGNYDLNKAAELRHGKIPEVEKELKVAEEAGTHHENENRLLREEVSEEEIANIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAYLLEGLQENGAIKEEARDLVMGELRGHFRPEFLNRVDEIILFKPLTTHEIKGIVDKIVKELQGRLVERHIT
VALTESAKEFIVESGFDPMYGARPLKRYVQRQIETKLARELIAGTIIDNSHVVVDVENNEFVVHVK
Nucleotide
Download Length: 2601 bp
>NTDB_id=252105 CG478_RS09850 WP_011983974.1 1871314..1873914(-) (clpC) [Bacillus cytotoxicus strain CH_4]
ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA
ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA
GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCGAAAAAACTGCAAGATGA
ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA
TTACAAAGGATACATTACTACAGTCTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA
TATGAAGCGTTAGAGAAATATGGTCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA
TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG
GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC
TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG
GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGCGAGCTTCATTGTATCGGTGCGACAACTTTAGAT
GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA
AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG
TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA
TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT
TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT
TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG
AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG
TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC
GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA
GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC
AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG
GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG
TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGGTATGAGGAAGGCGGACA
ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAAATTGAAAAAGCACATCCGGAAGTGTTTA
ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT
ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA
CCTTGTTATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC
TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA
GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG
ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG
TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA
ATGGACTTAAATCAAATGACGACAAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCACCA
AGAAGTAGATACTGTTCATCTATTGCTTGCGTTGCTAAAGCAGCAGGATGGATTAGCGGTACGTATTTTTCAAAAAATGA
ATGTGAATATAGAACAATTAACGAAAGAAGTGGAAACGCTTATTCAGAAAAAGCCATCTGTAACAGGAAGTGGGATAGAA
GCTGGGAAACTGTATATTACAGGCGCTTTGCAACAATTGCTCGTTAAGGCAGAAGCGGAAGCGAAAAAACTGCAAGATGA
ATACATTTCAGTAGAACATGTATTATTAGCTTTTTGTGAAGAAACAGGGGATGTAAATCGTCTATTTTCTAATTTCCGTA
TTACAAAGGATACATTACTACAGTCTTTAATGGCAGTTCGGGGGAATCAAAGAGTGACAAGTCAAAATCCAGAAGTAACA
TATGAAGCGTTAGAGAAATATGGTCGTGATTTGGTCGCAGAAGTGAAACAAGGAAAAATTGACCCTGTAATTGGACGCGA
TAGTGAGATTCGCCGCGTCATTCGCATTCTTTCGCGTAAAACAAAAAATAACCCTGTGTTAATTGGTGAACCTGGTGTGG
GGAAAACAGCCATTGTGGAAGGATTAGCGCAGCGAATTGTAAAAAAAGATGTACCGGAAGGATTAAAAGATCGCACCATC
TTTGCGTTAGATATGAGCGCCCTTGTAGCTGGAGCAAAATTCCGCGGGGAGTTTGAAGAACGTTTACAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGACGTATTCTGTTATTCATTGATGAACTGCATACAATTGTAGGAGCTGGGAAAACAGAAG
GAGCAATGGATGCTGGGAATATGTTGAAACCGATGCTTGCGCGCGGCGAGCTTCATTGTATCGGTGCGACAACTTTAGAT
GAGTACCGAAAATATATTGAAAAAGATCCGGCGTTAGAACGTCGTTTTCAACAAGTATTAGCGGAAGAGCCAACGGTGGA
AGATACGATTTCTATTTTACGTGGTCTCAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATCCATGACCGTGCGCTTG
TAGCAGCTTCTGTATTATCTGATCGCTATATCTCTGATCGTTTTTTACCGGATAAAGCAATTGATCTTGTTGATGAGGCA
TGCGCTACCATTCGGACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGTTAGAAAT
TGAAGAAGCGGCGCTTGGAAAAGAAACGGATCGCGGTAGTCAAGAAAGGTTGAAAACATTACAGCACGAGTTATCTGATT
TAAAAGAAGTGGCAAGTGGCATGCGTGCGCAGTGGGAAAAAGAAAAAGAAGAAATTCATAAAGTACGCAACTTGCGCGAG
AAATTAGAGCGTTTGCGCCGTGAACTGGAAGAAGCAGAAGGAAACTATGATTTAAATAAAGCGGCTGAACTTCGTCACGG
TAAAATTCCAGAGGTAGAAAAAGAATTAAAAGTAGCAGAAGAAGCCGGAACACATCATGAAAACGAGAACCGTTTGCTTC
GTGAAGAAGTAAGTGAAGAAGAAATCGCAAATATTGTTTCGCGCTGGACAGGAATTCCAGTAGCGAAATTAGTAGAAGGA
GAACGTGAAAAGTTACTGCGATTAGAGCAAATTTTATCAGAGCGTGTAATTGGTCAAGAAGAAGCAGTAAGTCTTGTAGC
AGATGCAGTTCTTCGTGCGAGAGCAGGAATTAAAGACCCGAATCGCCCGATTGGTTCTTTCATTTTCTTAGGACCGACAG
GGGTTGGGAAAACTGAACTTGCGAAAACATTAGCACAGTCGTTATTTGATAGCGAAGAACAAATGATCCGGATAGATATG
TCTGAGTATATGGAAAAACATGCGGTATCCCGTTTAATTGGAGCGCCTCCAGGATATGTAGGGTATGAGGAAGGCGGACA
ATTAACAGAAGCGGTTCGTCGCAAACCATATTCCGTTATTTTATTGGATGAAATTGAAAAAGCACATCCGGAAGTGTTTA
ATATTTTATTACAAATGTTAGATGATGGTCGCATTACCGATTCACAAGGACGAACAGTCGACTTTAAAAATACAGTAATT
ATTATGACATCAAATATTGGATCCGCATATTTATTAGAAGGATTACAAGAGAATGGCGCTATAAAAGAGGAAGCAAGAGA
CCTTGTTATGGGGGAACTTAGAGGACATTTTCGTCCTGAGTTTTTAAACCGTGTAGATGAAATTATTTTATTTAAACCAC
TTACAACTCATGAAATAAAAGGAATTGTTGATAAGATTGTAAAAGAATTACAAGGACGTTTAGTGGAGCGTCATATTACA
GTTGCATTAACAGAATCCGCAAAAGAATTTATTGTAGAATCTGGGTTTGACCCTATGTATGGTGCACGTCCGTTAAAAAG
ATATGTGCAGCGCCAAATTGAAACGAAACTTGCAAGAGAATTAATTGCAGGAACAATAATAGATAATAGCCATGTAGTAG
TAGATGTAGAAAATAATGAATTCGTTGTGCATGTGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
47.771 |
100 |
0.483 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
40.46 |
100 |
0.406 |