Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SAB_RS06045 Genome accession   NC_007622
Coordinates   1215623..1216909 (+) Length   428 a.a.
NCBI ID   WP_000121115.1    Uniprot ID   -
Organism   Staphylococcus aureus RF122     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1210623..1221909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAB_RS06015 - 1211018..1211131 (+) 114 WP_001789890.1 hypothetical protein -
  SAB_RS06020 (SAB1119) tsf 1211166..1212047 (+) 882 WP_000201389.1 translation elongation factor Ts -
  SAB_RS06025 (SAB1120) pyrH 1212184..1212906 (+) 723 WP_000057330.1 UMP kinase -
  SAB_RS06030 (SAB1121) frr 1212925..1213479 (+) 555 WP_001280006.1 ribosome recycling factor -
  SAB_RS06035 (SAB1122) - 1213852..1214622 (+) 771 WP_000473708.1 isoprenyl transferase -
  SAB_RS06040 (SAB1123) - 1214629..1215411 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  SAB_RS06045 (SAB1124) eeP 1215623..1216909 (+) 1287 WP_000121115.1 RIP metalloprotease RseP Regulator
  SAB_RS06050 (SAB1125) - 1216929..1218632 (+) 1704 WP_000814113.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48223.62 Da        Isoelectric Point: 9.5201

>NTDB_id=25204 SAB_RS06045 WP_000121115.1 1215623..1216909(+) (eeP) [Staphylococcus aureus RF122]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKIFEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVYGFKNFLIGSTYIFSAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=25204 SAB_RS06045 WP_000121115.1 1215623..1216909(+) (eeP) [Staphylococcus aureus RF122]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATTACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTTTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATTTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACAACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAAACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTCTTCAAACCAATTGTATATGGATTTAAAAACTTTTTAATCGGTAGTACTTATATTTTTTCAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACTATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(191-265)

Peptidase family M50 (Peptidase_M50)

(9-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395

Multiple sequence alignment