Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CK910_RS09545 | Genome accession | NZ_CP023818 |
| Coordinates | 1996431..1996751 (-) | Length | 106 a.a. |
| NCBI ID | WP_042866149.1 | Uniprot ID | A0AAW7I6F3 |
| Organism | Aeromonas sp. CA23 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1991431..2001751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK910_RS09525 (CK910_09525) | - | 1991670..1992368 (-) | 699 | WP_098982521.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| CK910_RS23695 | - | 1992528..1992695 (+) | 168 | WP_157774608.1 | hypothetical protein | - |
| CK910_RS09530 (CK910_09530) | - | 1992769..1993740 (+) | 972 | WP_043554002.1 | response regulator | - |
| CK910_RS09535 (CK910_09535) | - | 1993815..1995212 (-) | 1398 | WP_042866150.1 | peptide MFS transporter | - |
| CK910_RS09540 (CK910_09540) | galU | 1995426..1996337 (-) | 912 | WP_043135330.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CK910_RS09545 (CK910_09545) | comEA | 1996431..1996751 (-) | 321 | WP_042866149.1 | ComEA family DNA-binding protein | Machinery gene |
| CK910_RS09550 (CK910_09550) | cysQ | 1996919..1997689 (+) | 771 | WP_098982523.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| CK910_RS09555 (CK910_09555) | - | 1997779..1998075 (-) | 297 | WP_043135321.1 | YciI family protein | - |
| CK910_RS09560 (CK910_09560) | - | 1998100..1998651 (-) | 552 | WP_042866146.1 | septation protein A | - |
| CK910_RS09565 (CK910_09565) | - | 1998766..2000271 (-) | 1506 | WP_098982526.1 | pyridoxal-dependent decarboxylase | - |
| CK910_RS09570 (CK910_09570) | - | 2000485..2001120 (+) | 636 | WP_043135324.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11238.11 Da Isoelectric Point: 9.6863
>NTDB_id=250338 CK910_RS09545 WP_042866149.1 1996431..1996751(-) (comEA) [Aeromonas sp. CA23]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTANINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTANINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=250338 CK910_RS09545 WP_042866149.1 1996431..1996751(-) (comEA) [Aeromonas sp. CA23]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTCTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCCACCACAGTCACCACCGCGAAGGAGAGCGGCAAGGTGAACCTGAATACGGCGAATATCAATG
AGTTAACTGCCCTCAAGGGGATCGGCGAGAAGAAGGCCCAGGCCATCGTCGACTTTCGCGAAAAGCAGGGCAAGTTCACC
ACGGTCGAACAACTGGCCGATGTGAGTGGCATAGGGCCGGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTCTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCCACCACAGTCACCACCGCGAAGGAGAGCGGCAAGGTGAACCTGAATACGGCGAATATCAATG
AGTTAACTGCCCTCAAGGGGATCGGCGAGAAGAAGGCCCAGGCCATCGTCGACTTTCGCGAAAAGCAGGGCAAGTTCACC
ACGGTCGAACAACTGGCCGATGTGAGTGGCATAGGGCCGGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
50.909 |
100 |
0.528 |
| comEA | Vibrio cholerae C6706 |
50.909 |
100 |
0.528 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.361 |
91.509 |
0.415 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
62.319 |
65.094 |
0.406 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |