Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   CGZ65_RS11475 Genome accession   NZ_CP023429
Coordinates   2291751..2293247 (-) Length   498 a.a.
NCBI ID   WP_096295901.1    Uniprot ID   -
Organism   Neisseria weixii strain 10022     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 2286751..2298247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ65_RS11450 (CGZ65_11450) - 2287791..2287988 (+) 198 WP_096295897.1 zinc-finger domain-containing protein -
  CGZ65_RS11455 (CGZ65_11455) - 2288001..2288348 (+) 348 WP_096296188.1 hypothetical protein -
  CGZ65_RS11460 (CGZ65_11460) - 2288409..2289233 (-) 825 WP_096295898.1 undecaprenyl-diphosphate phosphatase -
  CGZ65_RS11465 (CGZ65_11465) dsbA1 2289828..2290451 (-) 624 WP_378595461.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  CGZ65_RS11470 (CGZ65_11470) - 2290461..2291531 (-) 1071 WP_096295900.1 SPOR domain-containing protein -
  CGZ65_RS11475 (CGZ65_11475) comM 2291751..2293247 (-) 1497 WP_096295901.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  CGZ65_RS11480 (CGZ65_11480) - 2293259..2293579 (-) 321 WP_096295902.1 accessory factor UbiK family protein -
  CGZ65_RS11485 (CGZ65_11485) metK 2293679..2294846 (-) 1168 Protein_2344 methionine adenosyltransferase -
  CGZ65_RS11495 (CGZ65_11495) - 2295165..2295509 (-) 345 WP_096295904.1 hypothetical protein -
  CGZ65_RS11500 (CGZ65_11500) - 2295614..2296492 (+) 879 WP_096295905.1 lysophospholipid acyltransferase family protein -
  CGZ65_RS11505 (CGZ65_11505) - 2296556..2296855 (-) 300 WP_123803529.1 hypothetical protein -
  CGZ65_RS11510 (CGZ65_11510) cysE 2296911..2297753 (-) 843 WP_096295907.1 serine O-acetyltransferase -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53676.70 Da        Isoelectric Point: 7.3963

>NTDB_id=247031 CGZ65_RS11475 WP_096295901.1 2291751..2293247(-) (comM) [Neisseria weixii strain 10022]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFDFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQISMEKLAQYEFAGELALSGILRPVRGALAMAWQGMQAGRAFVLPLENARQAAVMKGITVYGAQSL
GEVAAHLNAVEPLAQTECPNLDRPSQHTNLPDLSDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQELSHERPFRSPHHSASSAAMVGGGSDPRPGEISLAHHGVLFLDEFPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPSKPCRCTPESIARYRSKISGPLFDRIDLTIEVPSLPAAELMQQ
QAGEPSADVLQRVLAARDRQYARQGKVNAALSVTELDSAANIEQEARDALGAMLEKLSLSARSFHRIIRVARTLADLAGD
KAVGRSHVLKAISFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=247031 CGZ65_RS11475 WP_096295901.1 2291751..2293247(-) (comM) [Neisseria weixii strain 10022]
ATGTCGCTCGCTTTGGTTTACAGTCGCGCCCTAAGTGGCATGAATGCGCCGTTGGTCGAGGTGGAAGCCCATCTTGCCAA
CGGTTTGCCGCATTTCAATATTGTCGGGCTGCCGGATACCGAAGTGAAGGAAAGCCGTGACCGTGTGCGGGCGGCGATTA
TCCAAAGCGGCTTTGATTTTCCGGCAAAAAAAATCACCGTCAATCTGGCGCCGGCCGATTTGCCCAAAGAATCCGGCCGG
TTTGATTTGCCCATTGCCATCGGCATTTTAGCCGCGTCAGGTCAGATTTCGATGGAGAAACTGGCGCAATACGAATTTGC
CGGCGAGCTGGCCTTGTCGGGTATATTGCGGCCTGTGCGCGGCGCATTGGCAATGGCGTGGCAGGGTATGCAGGCAGGGC
GGGCTTTTGTGCTGCCATTAGAAAATGCCCGGCAAGCCGCCGTGATGAAAGGCATCACGGTTTACGGTGCGCAATCGCTG
GGCGAAGTGGCGGCGCATTTAAATGCCGTCGAGCCTTTGGCGCAAACCGAATGCCCGAATCTCGACAGGCCGTCTCAACA
TACAAACTTGCCTGATTTAAGTGATGTAAAAGGGCAACATACCGCGCGTTTGGCTCTGGAAATTGCGGCGGCAGGAGGAC
ACAGTTTATTGATGATGGGGCCGCCGGGTACGGGTAAATCGATGTTGTCGCAGCGCTTGCCCGGTATTTTGCCGCCACTG
ACTGAAGACGAACTGGTCGAAGTATGGGCCTTGCGCTCATTGTTGCCCAATCATCAGCAAGAACTCAGCCACGAGCGGCC
GTTTCGGTCGCCCCATCACAGTGCCAGCTCGGCGGCGATGGTCGGCGGCGGTTCGGATCCGCGGCCGGGCGAGATTTCTT
TGGCGCACCACGGCGTATTGTTTCTCGACGAATTCCCCGAGTTTGACCGCAAAGTGTTGGAAGTGTTGCGCGAGCCGTTG
GAAAACGGTGAAATCCACATTTCCCGTGCGGCGCGGCAGGCGGTCTATCCGGCCAAATTCCAATTGGTGGCGGCGATGAA
CCCGTGTCCGTGCGGCTATCTCGGTCACCCGAGCAAACCCTGCCGCTGCACGCCCGAGAGCATCGCGCGTTACCGCAGCA
AAATTTCAGGGCCGCTGTTTGACCGCATTGATTTAACCATTGAAGTGCCGAGCCTGCCTGCCGCAGAATTGATGCAGCAG
CAAGCGGGCGAACCCAGTGCCGATGTGTTACAGCGGGTGTTGGCGGCGCGCGACAGACAATATGCGCGCCAAGGTAAAGT
GAATGCCGCCTTGAGCGTGACCGAATTAGACAGCGCGGCCAATATCGAACAGGAAGCGCGCGATGCCTTAGGTGCGATGC
TGGAAAAATTATCACTTTCGGCACGCAGTTTCCACCGCATCATACGCGTAGCGCGCACCTTGGCCGATTTGGCCGGCGAT
AAGGCCGTCGGCCGCAGCCATGTGCTGAAAGCCATCAGCTTCCGCAGGGCGTTGTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.094

100

0.534
  comM Vibrio campbellii strain DS40M4

52.113

99.799

0.52
  comM Glaesserella parasuis strain SC1401

49.507

100

0.504
  comM Haemophilus influenzae Rd KW20

49.801

100

0.502
  comM Legionella pneumophila str. Paris

46.85

100

0.478
  comM Legionella pneumophila strain ERS1305867

46.85

100

0.478
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

44.135

100

0.446

Multiple sequence alignment