Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   CGZ65_RS11465 Genome accession   NZ_CP023429
Coordinates   2289828..2290451 (-) Length   207 a.a.
NCBI ID   WP_378595461.1    Uniprot ID   -
Organism   Neisseria weixii strain 10022     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2284828..2295451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ65_RS11440 (CGZ65_11440) - 2285980..2286315 (-) 336 WP_096295895.1 lipopolysaccharide assembly LapA domain-containing protein -
  CGZ65_RS11445 (CGZ65_11445) ilvE 2286650..2287648 (+) 999 WP_096295896.1 branched-chain-amino-acid transaminase -
  CGZ65_RS11450 (CGZ65_11450) - 2287791..2287988 (+) 198 WP_096295897.1 zinc-finger domain-containing protein -
  CGZ65_RS11455 (CGZ65_11455) - 2288001..2288348 (+) 348 WP_096296188.1 hypothetical protein -
  CGZ65_RS11460 (CGZ65_11460) - 2288409..2289233 (-) 825 WP_096295898.1 undecaprenyl-diphosphate phosphatase -
  CGZ65_RS11465 (CGZ65_11465) dsbA1 2289828..2290451 (-) 624 WP_378595461.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  CGZ65_RS11470 (CGZ65_11470) - 2290461..2291531 (-) 1071 WP_096295900.1 SPOR domain-containing protein -
  CGZ65_RS11475 (CGZ65_11475) comM 2291751..2293247 (-) 1497 WP_096295901.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  CGZ65_RS11480 (CGZ65_11480) - 2293259..2293579 (-) 321 WP_096295902.1 accessory factor UbiK family protein -
  CGZ65_RS11485 (CGZ65_11485) metK 2293679..2294846 (-) 1168 Protein_2344 methionine adenosyltransferase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23062.63 Da        Isoelectric Point: 9.3772

>NTDB_id=247030 CGZ65_RS11465 WP_378595461.1 2289828..2290451(-) (dsbA1) [Neisseria weixii strain 10022]
MKMKLFSALMALSLAGMAQAATEGKDYQVLAKPIPQVQTDKVEVLEFFGYFCVHCYHLDPVLLKHSQSFAKDTYLRTEHV
VWQPEMFGMARVAAAVNSSGLKYQANPAVFKAVYEQKINLADSATFKQWAAAQKGFDGKKLVAAYDSAANQAQARKMQGL
TETYRIESTPMVIVGGKYEVLFNGDYQNGMRTIDELVAKVRSERGLK

Nucleotide


Download         Length: 624 bp        

>NTDB_id=247030 CGZ65_RS11465 WP_378595461.1 2289828..2290451(-) (dsbA1) [Neisseria weixii strain 10022]
ATGAAAATGAAATTATTCTCGGCATTGATGGCCTTGTCTTTGGCCGGTATGGCGCAAGCCGCTACCGAAGGCAAGGATTA
CCAAGTGCTGGCCAAACCGATTCCGCAGGTTCAGACAGATAAGGTGGAAGTGTTGGAATTTTTCGGTTACTTCTGCGTGC
ATTGCTACCATTTGGATCCGGTGTTGTTGAAGCACAGCCAATCCTTTGCCAAAGACACATACTTGCGTACCGAGCATGTA
GTTTGGCAGCCGGAAATGTTCGGCATGGCACGCGTGGCCGCTGCGGTGAACAGTTCCGGTTTGAAGTACCAAGCCAATCC
GGCTGTGTTCAAAGCGGTATATGAGCAAAAAATCAACCTGGCCGACAGTGCAACTTTCAAACAATGGGCTGCGGCGCAAA
AAGGTTTTGACGGTAAAAAATTGGTTGCCGCCTATGATTCAGCAGCCAATCAAGCTCAAGCCAGAAAAATGCAAGGTTTG
ACCGAAACCTACCGTATCGAAAGCACGCCGATGGTGATTGTCGGCGGCAAATATGAAGTGTTGTTCAACGGCGATTATCA
AAACGGCATGAGAACCATTGATGAATTGGTTGCCAAAGTGCGCAGTGAGCGCGGTTTGAAGTAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(83-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

58.152

88.889

0.517
  dsbA2 Neisseria meningitidis MC58

55.191

88.406

0.488

Multiple sequence alignment