Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   BaGK_RS16700 Genome accession   NZ_CP022653
Coordinates   3369225..3370127 (-) Length   300 a.a.
NCBI ID   WP_094233215.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain GQJK17     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3364225..3375127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaGK_RS16665 (BaGK_16665) - 3364477..3364953 (+) 477 WP_094232698.1 Na+/H+ antiporter subunit E -
  BaGK_RS16670 (BaGK_16670) - 3364953..3365237 (+) 285 WP_094232699.1 Na(+)/H(+) antiporter subunit F1 -
  BaGK_RS16675 (BaGK_16675) mnhG 3365221..3365595 (+) 375 WP_061570550.1 monovalent cation/H(+) antiporter subunit G -
  BaGK_RS16680 (BaGK_16680) - 3365634..3366014 (-) 381 WP_010789785.1 hotdog fold thioesterase -
  BaGK_RS16685 (BaGK_16685) comA 3366032..3366673 (-) 642 WP_094232700.1 response regulator transcription factor Regulator
  BaGK_RS16690 (BaGK_16690) comP 3366754..3369060 (-) 2307 WP_094232701.1 two-component system sensor histidine kinase ComP Regulator
  BaGK_RS16695 (BaGK_16695) comX 3369074..3369241 (-) 168 WP_094232702.1 competence pheromone ComX Regulator
  BaGK_RS16700 (BaGK_16700) comQ 3369225..3370127 (-) 903 WP_094233215.1 polyprenyl synthetase family protein Regulator
  BaGK_RS16705 (BaGK_16705) degQ 3370311..3370454 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  BaGK_RS16710 (BaGK_16710) - 3370913..3371272 (+) 360 WP_094232703.1 hypothetical protein -
  BaGK_RS16715 (BaGK_16715) - 3371291..3372523 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -
  BaGK_RS16720 (BaGK_16720) - 3372661..3374127 (-) 1467 WP_088117879.1 nicotinate phosphoribosyltransferase -
  BaGK_RS16725 (BaGK_16725) - 3374143..3374694 (-) 552 WP_003327145.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 300 a.a.        Molecular weight: 34418.25 Da        Isoelectric Point: 4.9221

>NTDB_id=241263 BaGK_RS16700 WP_094233215.1 3369225..3370127(-) (comQ) [Bacillus atrophaeus strain GQJK17]
MKEIIKQNIFNDDLSQLLYSFIDSKDLFSFAESTILHYVVFGGEDLDVATKLGAGIEILILSSDILDDLEDEDNHQAFWM
KIDRSESLNAALSLYTAGLSSIHSMNINPLIFNYVLKYVKEAMQGQHDDITNKSKTEDECLEVIKFKCGSLVALANVTGV
ILASGEYSEIVERYSYYKGIVAQISGDYHVLFSRNRSDIEKNKQTLVYLYIKRIFNEASEELFYLFSHKDLYYKALADKD
KFEKKLIEAGVTQYISVLLQLYKQKCISAIEQLNLDKAKKEIIKEHLLNYKKDDENARSN

Nucleotide


Download         Length: 903 bp        

>NTDB_id=241263 BaGK_RS16700 WP_094233215.1 3369225..3370127(-) (comQ) [Bacillus atrophaeus strain GQJK17]
ATGAAAGAAATTATAAAACAAAACATTTTTAACGATGATTTATCACAGCTTCTTTACTCATTTATCGATTCAAAAGATTT
ATTTTCCTTTGCCGAATCAACAATTTTACATTACGTTGTTTTTGGAGGGGAGGATTTAGATGTTGCTACGAAGCTGGGTG
CGGGAATAGAAATCCTTATTCTTTCATCGGATATCTTGGATGATCTTGAAGATGAAGACAATCACCAGGCTTTTTGGATG
AAAATTGATCGTTCAGAATCCTTAAATGCAGCACTTTCTTTGTATACAGCAGGATTATCAAGTATACATTCAATGAATAT
CAATCCTTTGATATTTAACTATGTTTTAAAATATGTAAAAGAAGCCATGCAAGGACAACACGATGATATCACTAATAAAT
CCAAGACAGAAGATGAATGTTTAGAGGTAATTAAATTTAAATGTGGAAGCCTAGTTGCCTTAGCTAATGTAACAGGGGTT
ATTTTGGCGTCAGGAGAATATAGTGAAATAGTAGAAAGATACTCCTATTATAAGGGGATTGTAGCTCAAATTTCTGGAGA
TTACCACGTTCTTTTTTCTAGGAATCGCAGTGATATTGAAAAAAACAAACAGACACTGGTTTATTTATATATTAAACGAA
TATTTAATGAAGCTTCAGAAGAATTATTTTACTTATTTTCTCATAAAGACTTATATTACAAAGCGTTAGCAGATAAGGAT
AAATTCGAAAAAAAGTTAATTGAGGCAGGAGTTACTCAATACATTTCAGTATTATTGCAATTATATAAGCAGAAATGTAT
TTCTGCTATAGAACAATTAAACTTAGATAAAGCTAAAAAAGAGATAATAAAGGAACACCTATTAAACTATAAAAAGGATG
ATGAAAATGCAAGATCTAATTAA

Domains


Predicted by InterproScan.

(44-217)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

80.602

99.667

0.803


Multiple sequence alignment