Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BaGK_RS16690 Genome accession   NZ_CP022653
Coordinates   3366754..3369060 (-) Length   768 a.a.
NCBI ID   WP_094232701.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain GQJK17     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3361754..3374060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaGK_RS16650 (BaGK_16650) - 3362225..3362656 (+) 432 WP_094232696.1 Na(+)/H(+) antiporter subunit B -
  BaGK_RS16655 (BaGK_16655) - 3362656..3362997 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  BaGK_RS16660 (BaGK_16660) - 3362990..3364471 (+) 1482 WP_094232697.1 Na+/H+ antiporter subunit D -
  BaGK_RS16665 (BaGK_16665) - 3364477..3364953 (+) 477 WP_094232698.1 Na+/H+ antiporter subunit E -
  BaGK_RS16670 (BaGK_16670) - 3364953..3365237 (+) 285 WP_094232699.1 Na(+)/H(+) antiporter subunit F1 -
  BaGK_RS16675 (BaGK_16675) mnhG 3365221..3365595 (+) 375 WP_061570550.1 monovalent cation/H(+) antiporter subunit G -
  BaGK_RS16680 (BaGK_16680) - 3365634..3366014 (-) 381 WP_010789785.1 hotdog fold thioesterase -
  BaGK_RS16685 (BaGK_16685) comA 3366032..3366673 (-) 642 WP_094232700.1 response regulator transcription factor Regulator
  BaGK_RS16690 (BaGK_16690) comP 3366754..3369060 (-) 2307 WP_094232701.1 two-component system sensor histidine kinase ComP Regulator
  BaGK_RS16695 (BaGK_16695) comX 3369074..3369241 (-) 168 WP_094232702.1 competence pheromone ComX Regulator
  BaGK_RS16700 (BaGK_16700) comQ 3369225..3370127 (-) 903 WP_094233215.1 polyprenyl synthetase family protein Regulator
  BaGK_RS16705 (BaGK_16705) degQ 3370311..3370454 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  BaGK_RS16710 (BaGK_16710) - 3370913..3371272 (+) 360 WP_094232703.1 hypothetical protein -
  BaGK_RS16715 (BaGK_16715) - 3371291..3372523 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88806.26 Da        Isoelectric Point: 8.1786

>NTDB_id=241261 BaGK_RS16690 WP_094232701.1 3366754..3369060(-) (comP) [Bacillus atrophaeus strain GQJK17]
MKNLIKKFTIAVIVLSVLYVCYIAYINMNGIIIGTKVDKNNKNQLVIEEISESSYGQFVGLRQGDTILKINEGKPTEKHT
KWGYLSHINSLDIIRNGKIIHLEDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVSKIRKSFAGYILILLLLDISI
AYISAGGPFRGHRINRYINLFTFISSPILYLQFIQGYLKEIGKTFLNSLISFLYIIPILNIVIEFIGYNQVNNDILANIN
LVSFAALTLFAFISIYFHLNKYKYSEHSFILKLLILTNTLSFAPFLIFYVLPIILTGNYIFPALASASLLVLIPFGLVYQ
FVANKLFDIEFILGRMRYYALLAIIPTLFIVGALVWFDLVKIQMNPARQTVFIFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRSVTSFQQVFKELKNSILEVLLVSKAYTFEVASDNKVIYLDKQEIEPEWHLYQKEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMQIEELMDHLKDLKQEGTNPIWLKKLM
FAIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDL
GLVKALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDGV
GFDKEKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=241261 BaGK_RS16690 WP_094232701.1 3366754..3369060(-) (comP) [Bacillus atrophaeus strain GQJK17]
TTGAAGAACTTGATAAAAAAATTCACAATAGCTGTAATTGTTTTAAGTGTTCTCTATGTTTGCTATATAGCATATATCAA
TATGAATGGTATTATAATTGGCACTAAGGTTGATAAAAATAATAAAAATCAACTTGTAATTGAAGAAATTTCGGAGTCTT
CTTATGGACAATTTGTTGGTCTCAGACAGGGAGATACCATTTTAAAAATTAATGAAGGAAAACCAACAGAAAAGCATACA
AAATGGGGCTATTTGAGTCACATTAACAGTTTGGATATTATAAGAAATGGAAAAATAATTCATCTTGAAGATTTTGATTT
AGTTACTTTAAATAGACCGTATAGTTTCTTTCTGTTTGTACTTCCTTTGGTTTTTTATTTTTTAAGTATAATCTGCATTT
TTTATATACTTAAGGTAAGTAAGATAAGAAAATCATTTGCTGGGTATATTCTTATTTTGTTGTTGTTAGACATTTCAATA
GCATATATAAGTGCAGGTGGGCCATTTAGGGGACATAGAATAAATAGATATATAAATTTGTTTACTTTCATATCCTCTCC
TATTCTTTATCTTCAGTTTATTCAAGGATATCTTAAAGAAATAGGAAAAACCTTTTTGAATAGTTTAATCTCTTTTCTCT
ATATCATACCAATATTGAATATTGTGATTGAGTTTATAGGCTATAATCAAGTTAATAATGACATTTTAGCGAATATTAAC
TTAGTTTCTTTTGCAGCCTTAACTCTATTTGCTTTTATATCTATATACTTTCATCTGAATAAATATAAATATTCTGAGCA
TTCATTTATTCTTAAACTATTAATTCTAACAAATACACTTTCATTTGCGCCATTTTTGATATTTTATGTTCTCCCGATTA
TACTCACAGGGAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTGCTCGTACTTATCCCGTTCGGATTAGTGTATCAA
TTTGTTGCCAATAAACTGTTTGATATAGAATTTATTTTAGGAAGAATGAGATATTATGCTCTCCTTGCTATCATACCGAC
TCTATTCATAGTTGGGGCATTAGTGTGGTTTGATTTAGTGAAAATACAGATGAATCCTGCACGCCAAACTGTATTTATTT
TCGTTGTCATGTTCGCAGTCTTTTATTTTAAAGAGGTTATAGATTTTAAATTTCGATTAAAACGTTTCTCTGAAAAATTC
AATTATCAGGACAGTATTTTTAAATACACTCAGCTAATGAGGAGCGTAACTTCTTTCCAACAAGTCTTTAAAGAACTAAA
GAATTCAATTTTAGAAGTTTTACTCGTAAGCAAAGCCTATACTTTTGAAGTTGCTTCTGACAACAAAGTGATATATTTAG
ATAAGCAGGAAATTGAACCGGAGTGGCACCTTTATCAAAAGGAATTTGAGAACGTAACATCAGAAATTGGGAAAATTATC
GAAGTTAATCAAGGCTTTCTCATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTGTCCAACATTAA
CACCCCTAGACTGACCCGTGATGAAATCTCATGGCTGAAGACATTGTCTTTTTACACTAGTGTATCAATGGAAAATGTCA
TGCAGATTGAAGAACTGATGGATCACCTGAAAGATTTAAAGCAAGAGGGAACGAATCCAATATGGCTGAAAAAGCTGATG
TTCGCCATCGAAGAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAA
ACGGCAATGCGAGCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAA
TGAATCAGCAGATGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTG
GGATTGGTAAAGGCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGAAG
GTTTACGGCATCGCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGC
ATTCCCAAGCCGGCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATCGTTCTTCATTATGAGGATGACGGCGTT
GGCTTTGATAAGGAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGCATTAAAGAGCGGGTTCGTGCGTTAGA
CGGGCACCTTCGGATCGATACAAGCGTAGGAAATGGATTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

86.364

100

0.866


Multiple sequence alignment