Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   Sp14A_RS11445 Genome accession   NZ_CP022601
Coordinates   2244018..2245166 (+) Length   382 a.a.
NCBI ID   WP_115131126.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain 14A0014     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2239018..2250166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS11420 (Sp14A_23590) - 2240149..2241351 (+) 1203 WP_115129493.1 IS110 family transposase -
  Sp14A_RS11425 (Sp14A_23600) - 2241587..2242843 (+) 1257 WP_115130315.1 ISL3 family transposase -
  Sp14A_RS11440 (Sp14A_23630) rlmH 2243238..2243717 (-) 480 WP_115131125.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  Sp14A_RS11445 (Sp14A_23640) htrA 2244018..2245166 (+) 1149 WP_115131126.1 trypsin-like peptidase domain-containing protein Regulator
  Sp14A_RS11450 (Sp14A_23650) spo0J 2245220..2245987 (+) 768 WP_115131127.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 40491.01 Da        Isoelectric Point: 4.3484

>NTDB_id=241080 Sp14A_RS11445 WP_115131126.1 2244018..2245166(+) (htrA) [Streptococcus pluranimalium strain 14A0014]
MAGAYLMLYFSNNLSTPLNNSQSKAKTSNVVYNNTTNTTKAAKKVQDAVVSVINYQKNTDSSLNDLYSQMFGGGDDKRSE
DDLSVYSEGSGVIYRKEGGSAYIVTNNHVIDGAENIEIMLADGTKVVGELVGSDTYSDLAVVKISDEKVSTVAEFADSDK
LNVGEVAIAMGSPLGSEYANSVTQGIVSSLSRTVTLKNEEGETISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKIS
STSTAREAVEGMGFAIPSNDVIKIINQLEKNGQVTRPALGISMANLSDLSTSAISELNIPNKLTGGIVVATVQDKMPASG
KLKQYDVITEIDGEEITSTSDLQSILYGHEIGDTIKITYYRGKDKQTTDIKLSKSTQDLENS

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=241080 Sp14A_RS11445 WP_115131126.1 2244018..2245166(+) (htrA) [Streptococcus pluranimalium strain 14A0014]
ATGGCAGGAGCTTATCTCATGCTCTATTTTTCCAATAACCTGTCAACTCCTTTGAATAATTCGCAATCCAAAGCCAAAAC
AAGCAATGTGGTTTACAATAATACTACCAACACGACTAAAGCAGCCAAAAAAGTCCAAGATGCTGTTGTATCAGTTATTA
ACTACCAAAAGAATACCGATTCTTCTTTAAATGATCTTTATAGTCAAATGTTTGGTGGAGGCGATGATAAGCGTTCTGAA
GATGATTTGAGTGTCTACAGCGAAGGCTCTGGCGTTATTTATCGAAAAGAAGGTGGATCAGCTTATATCGTCACTAACAA
TCACGTTATTGATGGAGCTGAAAATATCGAAATTATGCTTGCTGATGGAACAAAAGTCGTCGGAGAACTTGTTGGATCTG
ATACTTACTCCGATTTAGCTGTTGTCAAAATTTCTGATGAAAAAGTATCTACAGTTGCGGAGTTCGCAGACTCTGATAAA
TTAAACGTTGGAGAAGTAGCGATTGCAATGGGTAGCCCTCTAGGAAGTGAATATGCTAACTCTGTTACACAAGGAATTGT
GTCAAGTCTAAGCCGTACAGTAACGCTTAAAAATGAGGAGGGGGAAACCATTTCAACCAATGCTATCCAAACAGATGCTG
CCATCAACCCTGGTAACTCTGGTGGTGCTTTGATTAATATTGAAGGACAAGTTATTGGTATCAATTCAAGTAAAATCTCA
TCTACCTCAACTGCTCGCGAAGCCGTAGAAGGCATGGGATTTGCTATCCCATCTAATGATGTCATCAAAATTATCAATCA
GTTAGAAAAAAATGGACAAGTAACTCGCCCAGCACTAGGCATCTCTATGGCGAATCTTAGCGATCTCTCAACAAGTGCTA
TCTCAGAACTGAATATCCCAAATAAGCTTACTGGAGGTATTGTTGTTGCCACTGTGCAAGATAAAATGCCTGCCTCAGGT
AAACTGAAACAATATGATGTCATCACTGAAATTGATGGTGAAGAAATAACATCAACCAGTGATCTACAAAGTATTCTTTA
TGGTCACGAAATTGGTGATACGATAAAAATCACCTACTACCGTGGTAAAGATAAGCAGACCACTGACATTAAGTTAAGCA
AGTCAACACAAGATTTAGAAAACAGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

67.112

97.906

0.657

  htrA Streptococcus mitis NCTC 12261

63.897

91.361

0.584

  htrA Streptococcus gordonii str. Challis substr. CH1

58.575

99.215

0.581

  htrA Streptococcus pneumoniae TIGR4

63.61

91.361

0.581

  htrA Streptococcus pneumoniae R6

63.61

91.361

0.581

  htrA Streptococcus pneumoniae Rx1

63.61

91.361

0.581

  htrA Streptococcus pneumoniae D39

63.61

91.361

0.581


Multiple sequence alignment