Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   Sp14A_RS11450 Genome accession   NZ_CP022601
Coordinates   2245220..2245987 (+) Length   255 a.a.
NCBI ID   WP_115131127.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain 14A0014     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2240220..2250987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS11425 (Sp14A_23600) - 2241587..2242843 (+) 1257 WP_115130315.1 ISL3 family transposase -
  Sp14A_RS11440 (Sp14A_23630) rlmH 2243238..2243717 (-) 480 WP_115131125.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  Sp14A_RS11445 (Sp14A_23640) htrA 2244018..2245166 (+) 1149 WP_115131126.1 trypsin-like peptidase domain-containing protein Regulator
  Sp14A_RS11450 (Sp14A_23650) spo0J 2245220..2245987 (+) 768 WP_115131127.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29321.59 Da        Isoelectric Point: 8.4256

>NTDB_id=241081 Sp14A_RS11450 WP_115131127.1 2245220..2245987(+) (spo0J) [Streptococcus pluranimalium strain 14A0014]
MEDILKDIQISDITTNPNQPRHHFNEEEIKELAESIANNGLIQPIIVRPSDIIGYELIAGERRLRAHQYLGKKSIKAVIT
DKSYQESMKQALIENLQRADLNPIEEAKAYQNILDKLELTHQELAISVGKSRPYISNQLRLLQLSKSWQNAIRKGVVMPG
HARLILNLSPKEQDIWLNDIISQQLSVHQLEQKLKQERHSPSSKEKVIFQDHLEKELQKSLGLEVSISGFQQKKGQLSIS
FANEEEFNRIINKLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=241081 Sp14A_RS11450 WP_115131127.1 2245220..2245987(+) (spo0J) [Streptococcus pluranimalium strain 14A0014]
ATGGAAGATATTTTAAAAGACATACAAATCAGTGATATTACAACAAATCCTAACCAACCTCGGCACCATTTCAATGAAGA
GGAAATTAAAGAACTTGCTGAATCAATAGCAAATAATGGACTGATCCAACCTATTATCGTTAGACCTTCTGATATTATTG
GATACGAACTAATTGCTGGAGAAAGGCGTCTAAGAGCTCATCAATATCTTGGCAAAAAATCTATTAAAGCTGTTATTACC
GATAAAAGTTATCAAGAAAGTATGAAGCAAGCTCTTATCGAAAATCTTCAAAGAGCTGACTTGAATCCCATTGAAGAAGC
TAAGGCTTACCAAAATATACTTGATAAATTAGAGCTTACCCACCAAGAATTAGCTATTAGTGTCGGAAAATCTCGTCCCT
ATATTTCTAATCAATTGCGCTTACTCCAACTTTCTAAATCTTGGCAAAATGCTATTCGAAAAGGGGTAGTTATGCCAGGC
CATGCACGACTGATTCTAAACCTCTCACCAAAAGAGCAAGACATCTGGCTAAATGATATTATTAGTCAACAATTAAGTGT
ACATCAATTAGAACAGAAATTAAAACAAGAGCGTCATTCGCCTTCTTCCAAAGAAAAAGTCATTTTTCAAGATCATCTCG
AAAAAGAACTGCAAAAATCGCTTGGTTTAGAAGTTAGCATTTCAGGATTTCAGCAAAAAAAAGGACAACTATCGATTAGC
TTCGCAAATGAAGAAGAATTCAACAGAATTATCAACAAGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

51.765

100

0.518


Multiple sequence alignment