Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | C7M30_RS21345 | Genome accession | NZ_CP028218 |
| Coordinates | 4078208..4079338 (-) | Length | 376 a.a. |
| NCBI ID | WP_160244964.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM102756 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4073208..4084338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M30_RS21310 (C7M30_04222) | yobQ | 4073582..4074307 (+) | 726 | WP_160245040.1 | helix-turn-helix domain-containing protein | - |
| C7M30_RS21315 (C7M30_04223) | csaA | 4074372..4074704 (+) | 333 | WP_014480003.1 | chaperone CsaA | - |
| C7M30_RS21320 (C7M30_04224) | aoxN | 4074954..4076390 (-) | 1437 | WP_139020905.1 | flavin monoamine oxidase family protein | - |
| C7M30_RS21325 (C7M30_04225) | yobM | 4076518..4077030 (+) | 513 | WP_139020903.1 | SMI1/KNR4 family protein | - |
| C7M30_RS21330 | - | 4077176..4077331 (+) | 156 | Protein_4182 | T7SS effector LXG polymorphic toxin | - |
| C7M30_RS22095 | - | 4077329..4077498 (+) | 170 | Protein_4183 | hypothetical protein | - |
| C7M30_RS22100 (C7M30_04227) | - | 4077721..4077921 (+) | 201 | WP_021481449.1 | hypothetical protein | - |
| C7M30_RS21340 (C7M30_04228) | - | 4078075..4078218 (-) | 144 | WP_021481448.1 | hypothetical protein | - |
| C7M30_RS21345 (C7M30_04229) | rapC | 4078208..4079338 (-) | 1131 | WP_160244964.1 | tetratricopeptide repeat protein | Regulator |
| C7M30_RS22105 | - | 4079423..4079545 (-) | 123 | WP_250620812.1 | phage holin | - |
| C7M30_RS21355 (C7M30_04230) | - | 4080417..4080791 (-) | 375 | WP_021481445.1 | YoqO family protein | - |
| C7M30_RS21360 | - | 4081044..4081338 (-) | 295 | Protein_4189 | SOS response-associated peptidase family protein | - |
| C7M30_RS21365 (C7M30_04232) | - | 4081519..4081884 (-) | 366 | WP_021481443.1 | hypothetical protein | - |
| C7M30_RS21370 (C7M30_04233) | - | 4082398..4082952 (+) | 555 | WP_101502347.1 | hypothetical protein | - |
| C7M30_RS21785 (C7M30_04234) | - | 4083287..4083460 (+) | 174 | WP_164971710.1 | hypothetical protein | - |
| C7M30_RS21375 (C7M30_04235) | - | 4083544..4083927 (+) | 384 | WP_101502483.1 | UPF0715 family protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44359.14 Da Isoelectric Point: 5.8915
>NTDB_id=240593 C7M30_RS21345 WP_160244964.1 4078208..4079338(-) (rapC) [Bacillus subtilis strain SRCM102756]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYELDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKNIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYELDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKNIEKAFILYKKGIEKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI
Nucleotide
Download Length: 1131 bp
>NTDB_id=240593 C7M30_RS21345 WP_160244964.1 4078208..4079338(-) (rapC) [Bacillus subtilis strain SRCM102756]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAAGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGTTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAACTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCACTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCGCATCTTCAAAGAGCCCTAAAAGATTCTAAAGCTATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGAAATTGTTATTATAAGATGAAAGAGTATGACAAAGCTGCT
GAATATATTGAACAAGCAGTTTCACTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACACTTACACA
AATTTACTTTAAAATGAAGAATATTGAAAAAGCCTTTATACTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATTAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTAATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAAGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGTTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAACTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCACTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCGCATCTTCAAAGAGCCCTAAAAGATTCTAAAGCTATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGAAATTGTTATTATAAGATGAAAGAGTATGACAAAGCTGCT
GAATATATTGAACAAGCAGTTTCACTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACACTTACACA
AATTTACTTTAAAATGAAGAATATTGAAAAAGCCTTTATACTTTATAAAAAAGGAATCGAGAAAGCACAAGCCATTAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTAATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
50.798 |
100 |
0.508 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
45.383 |
100 |
0.457 |