Detailed information NTG0240442

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: CG798_RS18130
• Genome accession: NZ_CP022531
• Coordinates: 3631909..3632523 (-)
• Length: 204 a.a.
• NCBI ID: WP_043021637.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain TB1501
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3626909..3637523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG798_RS18105 (CG798_18105)	rpsT	3627212..3627478 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
CG798_RS18110 (CG798_18110)	holA	3627495..3628536 (-)	1042	Protein_3473	DNA polymerase III subunit delta	-
CG798_RS19960	-	3628576..3628727 (-)	152	Protein_3474	hypothetical protein	-
CG798_RS18115 (CG798_18115)	-	3628768..3628902 (+)	135	WP_003152870.1	YqzM family protein	-
CG798_RS18120 (CG798_18120)	comEC	3628921..3631272 (-)	2352	WP_094031847.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CG798_RS18125 (CG798_18125)	-	3631273..3631842 (-)	570	WP_094031848.1	ComE operon protein 2	-
CG798_RS18130 (CG798_18130)	comEA	3631909..3632523 (-)	615	WP_043021637.1	helix-hairpin-helix domain-containing protein	Machinery gene
CG798_RS18135 (CG798_18135)	comER	3632582..3633403 (+)	822	WP_012118027.1	late competence protein ComER	-
CG798_RS18140 (CG798_18140)	-	3633472..3634209 (-)	738	WP_076424998.1	class I SAM-dependent methyltransferase	-
CG798_RS18145 (CG798_18145)	rsfS	3634206..3634562 (-)	357	WP_007408260.1	ribosome silencing factor	-
CG798_RS18150 (CG798_18150)	yqeK	3634580..3635140 (-)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
CG798_RS18155 (CG798_18155)	-	3635130..3635699 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
CG798_RS18160 (CG798_18160)	yhbY	3635710..3636000 (-)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
CG798_RS18165 (CG798_18165)	aroE	3635994..3636836 (-)	843	WP_094031849.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22165.31 Da
• Isoelectric Point: 6.4888

>NTDB_id=240442 CG798_RS18130 WP_043021637.1 3631909..3632523(-) (comEA) [Bacillus velezensis strain TB1501]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=240442 CG798_RS18130 WP_043021637.1 3631909..3632523(-) (comEA) [Bacillus velezensis strain TB1501]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCTGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGGGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CAGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA	Latilactobacillus sakei subsp. sakei 23K	32.759	100	0.373
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae D39	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae R6	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363