Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C7M30_RS00275 Genome accession   NZ_CP028218
Coordinates   81954..82571 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM102756     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 76954..87571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS00240 (C7M30_00046) ynzD 77196..77369 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  C7M30_RS00245 (C7M30_00047) yneF 77443..77661 (-) 219 WP_003221221.1 YneF family protein -
  C7M30_RS00250 (C7M30_00048) sirA 77747..78193 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C7M30_RS00255 (C7M30_00049) recP/tkt 78346..80349 (-) 2004 WP_003231593.1 transketolase Machinery gene
  C7M30_RS00260 (C7M30_00050) ynzC 80518..80751 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  C7M30_RS00265 (C7M30_00051) dinL 80815..81468 (-) 654 WP_160243738.1 recombinase family protein -
  C7M30_RS00270 (C7M30_00052) yneA 81487..81804 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  C7M30_RS00275 (C7M30_00053) dinR/lexA 81954..82571 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C7M30_RS21795 - 82953..83217 (-) 265 Protein_56 hypothetical protein -
  C7M30_RS00280 (C7M30_00054) fosM 83126..83560 (-) 435 WP_160243739.1 FosM family fosfomycin resistance protein -
  C7M30_RS00285 (C7M30_00055) - 83768..84217 (+) 450 WP_201757483.1 YndM family protein -
  C7M30_RS00290 (C7M30_00056) pghL 84244..85002 (-) 759 WP_021479204.1 gamma-polyglutamate hydrolase PghL -
  C7M30_RS00295 (C7M30_00057) - 85226..85540 (-) 315 WP_201757484.1 hypothetical protein -
  C7M30_RS00300 (C7M30_00058) yndJ 85630..87270 (-) 1641 WP_160243742.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=240442 C7M30_RS00275 WP_003238209.1 81954..82571(+) (dinR/lexA) [Bacillus subtilis strain SRCM102756]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=240442 C7M30_RS00275 WP_003238209.1 81954..82571(+) (dinR/lexA) [Bacillus subtilis strain SRCM102756]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment