Detailed information NTG0238660

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: LL14B4_RS13695
• Genome accession: NZ_CP028160
• Coordinates: 1083629..1084279 (-)
• Length: 216 a.a.
• NCBI ID: WP_109990845.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain 14B4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1078629..1089279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL14B4_RS05325 (LL14B4_05320)	-	1078785..1080317 (+)	1533	WP_058202813.1	Nramp family divalent metal transporter	-
LL14B4_RS05330 (LL14B4_05325)	-	1080419..1081387 (+)	969	WP_003130649.1	PhoH family protein	-
LL14B4_RS05335 (LL14B4_05330)	-	1081445..1081924 (+)	480	WP_021722517.1	NUDIX hydrolase	-
LL14B4_RS05340 (LL14B4_05335)	ybeY	1082076..1082564 (+)	489	WP_021722516.1	rRNA maturation RNase YbeY	-
LL14B4_RS05345 (LL14B4_05340)	-	1082548..1083003 (+)	456	WP_003130653.1	diacylglycerol kinase family protein	-
LL14B4_RS05350 (LL14B4_05345)	-	1083017..1083595 (+)	579	WP_021722515.1	nucleotidyltransferase family protein	-
LL14B4_RS13695 (LL14B4_05350)	comFC/cflB	1083629..1084279 (-)	651	WP_109990845.1	ComF family protein	Machinery gene
LL14B4_RS05360 (LL14B4_05355)	comFA	1084276..1085598 (-)	1323	WP_109990846.1	DEAD/DEAH box helicase	Machinery gene
LL14B4_RS05365 (LL14B4_05360)	-	1085655..1086284 (+)	630	WP_003130660.1	YigZ family protein	-
LL14B4_RS05370 (LL14B4_05365)	-	1086418..1086915 (+)	498	WP_003130662.1	VanZ family protein	-
LL14B4_RS05375 (LL14B4_05370)	-	1086963..1087982 (+)	1020	WP_012897709.1	DUF475 domain-containing protein	-
LL14B4_RS05380 (LL14B4_05375)	-	1088097..1088843 (+)	747	WP_200136626.1	bifunctional metallophosphatase/5'-nucleotidase	-

Sequence

Protein

• Length: 216 a.a.
• Molecular weight: 25335.46 Da
• Isoelectric Point: 9.2259

>NTDB_id=238660 LL14B4_RS13695 WP_109990845.1 1083629..1084279(-) (comFC/cflB) [Lactococcus lactis subsp. lactis strain 14B4]
MIKCLLCSRSIAQNFLFSELFLLKSPQNLLCSKCQKNFEKIPEAHCPRCCKPNVHEICTDCQNWEKRGYKIRHQAIFHYN
QAMKDYFSQYKFVGDYRLYQIFEPYFKSISLKSPLVPIPISPKRLEERGFNQVTAFLQQDNFIELLEKENSVKQSSLNRK
ERLESPNPFQLKKGLKVPTKVILIDDIYTTGTTLYHASQILKEAGVHEIRSFSLCR

Nucleotide

• Length: 651 bp

>NTDB_id=238660 LL14B4_RS13695 WP_109990845.1 1083629..1084279(-) (comFC/cflB) [Lactococcus lactis subsp. lactis strain 14B4]
ATGATAAAGTGTTTGCTTTGTTCAAGAAGTATTGCTCAAAACTTTCTATTTAGTGAACTTTTCCTACTCAAAAGTCCTCA
AAATCTTTTATGTTCTAAATGTCAAAAAAATTTTGAAAAGATCCCTGAAGCTCACTGTCCTCGCTGCTGTAAGCCAAATG
TCCATGAGATCTGTACTGATTGTCAAAATTGGGAAAAAAGAGGATACAAAATCAGACATCAGGCAATTTTTCACTACAAT
CAAGCAATGAAAGATTATTTTAGCCAGTATAAATTTGTTGGAGATTATCGATTATACCAAATTTTTGAGCCCTATTTTAA
AAGTATTTCCCTAAAATCTCCTTTGGTTCCAATTCCTATTTCACCAAAAAGATTAGAGGAACGTGGTTTCAATCAAGTGA
CTGCTTTTCTTCAACAAGATAATTTTATTGAACTTCTTGAAAAAGAGAATTCGGTCAAACAATCTAGCCTTAATCGAAAA
GAACGATTGGAAAGTCCAAATCCTTTTCAATTAAAAAAAGGGCTAAAAGTCCCTACAAAAGTTATATTAATTGACGATAT
TTATACAACAGGTACCACCTTATATCACGCATCACAAATTCTAAAAGAAGCTGGTGTTCATGAAATAAGGAGCTTTTCTC
TCTGCCGTTAA

Domains

Predicted by InterProScan.

• Phosphoribosyl transferase domain (Pribosyltran) (174-215)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus mitis NCTC 12261	46.606	100	0.477
comFC/cflB	Streptococcus mitis SK321	46.154	100	0.472
comFC/cflB	Streptococcus pneumoniae Rx1	45.249	100	0.463
comFC/cflB	Streptococcus pneumoniae D39	45.249	100	0.463
comFC/cflB	Streptococcus pneumoniae R6	45.249	100	0.463
comFC/cflB	Streptococcus pneumoniae TIGR4	45.249	100	0.463
comFC	Lactococcus lactis subsp. cremoris KW2	67.164	62.037	0.417
comFC	Bacillus subtilis subsp. subtilis str. 168	37.229	100	0.398