Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   BG910_RS09810 Genome accession   NZ_CP022278
Coordinates   2005034..2006530 (+) Length   498 a.a.
NCBI ID   WP_089036672.1    Uniprot ID   -
Organism   Neisseria chenwenguii strain 10023     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 2000034..2011530
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS09785 (BG910_09775) grpE 2000429..2001004 (-) 576 WP_089036667.1 nucleotide exchange factor GrpE -
  BG910_RS09790 (BG910_09780) cysE 2001187..2002005 (+) 819 WP_089036668.1 serine O-acetyltransferase -
  BG910_RS09795 (BG910_09785) - 2002069..2002944 (-) 876 WP_089036669.1 lysophospholipid acyltransferase family protein -
  BG910_RS09800 (BG910_09790) metK 2003423..2004592 (+) 1170 WP_089036670.1 methionine adenosyltransferase -
  BG910_RS09805 (BG910_09795) - 2004695..2005015 (+) 321 WP_089036671.1 accessory factor UbiK family protein -
  BG910_RS09810 (BG910_09800) comM 2005034..2006530 (+) 1497 WP_089036672.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  BG910_RS09815 (BG910_09805) - 2006710..2007765 (+) 1056 WP_089036673.1 SPOR domain-containing protein -
  BG910_RS09820 (BG910_09810) dsbA1 2007778..2008407 (+) 630 WP_089036674.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  BG910_RS09825 (BG910_09815) - 2008794..2009618 (+) 825 WP_089036675.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53172.07 Da        Isoelectric Point: 7.3489

>NTDB_id=237859 BG910_RS09810 WP_089036672.1 2005034..2006530(+) (comM) [Neisseria chenwenguii strain 10023]
MSLALVYSRALSGMNAPLVEVEAHLANGLPAFNIVGLPDTEVKESRDRVRAAIIQSGFDFPAKKITVNLAPADLPKESGR
FDLPIAVGILAASGQVSAEKLAQYEFAGELALSGLLRPVRGALAMAWQGMQAGHAFILPSENAKQAAVMKGITVYGANSL
GEVAAHLNAVEPLAQAECDIASRPSENGRLPDLSDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHSQDLSGQRPFRSPHHGASSAAMVGGGPDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPSKPCRCTQESIARYRSKISGPLLDRIDLTIEVPALSAAELMQQ
EAGESSAEVLKRVTAARAKQYARQGKVNAALSVTELDNAANIRKDAQEALGAMLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRQHVLRAVGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=237859 BG910_RS09810 WP_089036672.1 2005034..2006530(+) (comM) [Neisseria chenwenguii strain 10023]
ATGTCGCTGGCTTTGGTTTACAGCCGCGCTTTGAGCGGTATGAATGCGCCGTTGGTCGAGGTGGAAGCCCATCTTGCCAA
CGGCCTGCCTGCTTTTAACATCGTCGGCCTGCCGGATACGGAAGTGAAGGAAAGCCGCGACCGTGTGCGCGCGGCGATTA
TTCAGAGCGGCTTTGATTTTCCGGCCAAGAAAATCACCGTCAACCTCGCGCCGGCGGATCTGCCCAAAGAATCGGGACGG
TTTGACCTGCCGATTGCCGTCGGTATTTTGGCGGCTTCGGGGCAGGTTTCGGCGGAAAAGCTTGCGCAGTATGAATTTGC
GGGCGAGCTGGCGCTGTCGGGGCTGCTGCGTCCCGTGCGCGGTGCGTTGGCGATGGCCTGGCAGGGAATGCAGGCGGGGC
ACGCGTTTATCCTGCCGTCTGAAAATGCCAAACAGGCGGCGGTGATGAAAGGCATCACGGTTTACGGCGCAAATTCTTTG
GGCGAAGTGGCGGCGCATTTAAACGCCGTCGAGCCGCTGGCGCAGGCCGAGTGCGACATCGCTTCAAGGCCGTCTGAAAA
CGGCAGACTGCCCGATTTGAGCGACGTCAAAGGCCAGCATACCGCGCGTTTGGCGCTGGAAATCGCGGCGGCGGGCGGAC
ACAGCCTTTTGATGATGGGTCCGCCGGGTACGGGCAAATCCATGCTTTCGCAGCGCCTGCCCGGCATTCTGCCGCCGCTG
ACCGAAGACGAATTGGTCGAAGTTTGGGCGCTGCGCTCGCTTCTGCCCAACCACAGTCAGGATTTGAGCGGACAGCGGCC
GTTCCGCAGCCCGCACCACGGCGCCAGCTCGGCGGCGATGGTCGGCGGCGGCCCGGATCCGCGTCCGGGCGAAATTTCGC
TGGCGCACCACGGCGTTTTGTTTTTAGACGAACTGCCTGAGTTTGACCGTAAAGTTTTGGAAGTTTTGCGCGAACCGCTG
GAAAACGGCGAAATCCACATTTCCCGCGCCGCGCGGCAGGCGGTTTATCCGGCGAAGTTCCAACTGGTGGCGGCGATGAA
TCCCTGTCCGTGCGGCTATCTCGGCCATCCGAGCAAGCCCTGCCGCTGTACGCAGGAAAGCATCGCCAGATACCGCAGCA
AAATTTCCGGCCCGCTGCTCGACCGTATTGATTTGACGATTGAAGTCCCCGCGCTTTCCGCCGCCGAACTCATGCAGCAG
GAAGCGGGCGAAAGCAGCGCGGAAGTGTTGAAACGGGTAACGGCGGCGCGGGCGAAACAATACGCGCGGCAGGGTAAAGT
GAATGCGGCTTTGAGCGTGACCGAGCTGGACAACGCGGCAAACATCCGCAAAGACGCGCAGGAAGCGCTCGGCGCAATGC
TGGAAAAACTGTCCCTTTCCGCCCGCAGTTTCCACCGCATCATGCGCGTGGCGCGCACGCTGGCGGATTTGGCGGGCGAC
GAGGAAGTCGGGCGGCAGCACGTTTTGCGTGCGGTCGGTTTCCGCAGGGCTTTATAG

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

51.8

100

0.52
  comM Vibrio campbellii strain DS40M4

50.704

99.799

0.506
  comM Haemophilus influenzae Rd KW20

49.299

100

0.494
  comM Glaesserella parasuis strain SC1401

48.303

100

0.486
  comM Legionella pneumophila str. Paris

47.14

100

0.48
  comM Legionella pneumophila strain ERS1305867

47.14

100

0.48
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.168

100

0.438

Multiple sequence alignment