Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   BG910_RS09820 Genome accession   NZ_CP022278
Coordinates   2007778..2008407 (+) Length   209 a.a.
NCBI ID   WP_089036674.1    Uniprot ID   A0A220S3L2
Organism   Neisseria chenwenguii strain 10023     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2002778..2013407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS09800 (BG910_09790) metK 2003423..2004592 (+) 1170 WP_089036670.1 methionine adenosyltransferase -
  BG910_RS09805 (BG910_09795) - 2004695..2005015 (+) 321 WP_089036671.1 accessory factor UbiK family protein -
  BG910_RS09810 (BG910_09800) comM 2005034..2006530 (+) 1497 WP_089036672.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  BG910_RS09815 (BG910_09805) - 2006710..2007765 (+) 1056 WP_089036673.1 SPOR domain-containing protein -
  BG910_RS09820 (BG910_09810) dsbA1 2007778..2008407 (+) 630 WP_089036674.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  BG910_RS09825 (BG910_09815) - 2008794..2009618 (+) 825 WP_089036675.1 undecaprenyl-diphosphate phosphatase -
  BG910_RS09830 (BG910_09820) smc 2009690..2013181 (-) 3492 WP_089036676.1 chromosome segregation protein SMC -

Sequence


Protein


Download         Length: 209 a.a.        Molecular weight: 22708.29 Da        Isoelectric Point: 10.1028

>NTDB_id=237860 BG910_RS09820 WP_089036674.1 2007778..2008407(+) (dsbA1) [Neisseria chenwenguii strain 10023]
MKLKTAVAAFALTFAGFAQAATEGTDYTVLSKPIPQLQAGKVEVLSFFGYFCVHCNNLDPVLLKHSKTFAADTYLRPVHV
VWQPEMLGLARVAAAVNSAGMVHQANGALFNAVYGQKINLADSATFKQWAAAQRGFDGKKLTAAYDNPASLAEAKKMQAL
TETYRISSTPTVIVGGKYKLEFPNGYAQGMKTVDELIIKVRSERGLKKR

Nucleotide


Download         Length: 630 bp        

>NTDB_id=237860 BG910_RS09820 WP_089036674.1 2007778..2008407(+) (dsbA1) [Neisseria chenwenguii strain 10023]
ATGAAACTGAAAACCGCAGTTGCTGCATTCGCTTTGACATTTGCAGGTTTCGCGCAGGCCGCGACGGAAGGAACGGATTA
CACCGTTCTTTCCAAGCCGATTCCGCAGTTGCAGGCGGGTAAAGTGGAAGTGTTGTCGTTTTTCGGCTATTTCTGCGTCC
ATTGCAACAACCTCGATCCTGTTTTGCTGAAGCACAGCAAAACTTTTGCCGCCGATACCTACCTGCGCCCCGTGCATGTG
GTGTGGCAGCCTGAAATGCTGGGTCTGGCGCGCGTGGCTGCTGCGGTAAACAGCGCGGGTATGGTGCATCAGGCCAACGG
CGCGCTGTTTAATGCGGTGTACGGCCAGAAAATCAATCTTGCCGACAGTGCAACGTTCAAACAATGGGCGGCTGCGCAAC
GCGGTTTCGACGGCAAAAAGCTGACGGCGGCCTACGACAATCCCGCCAGCCTGGCCGAAGCCAAAAAAATGCAGGCGCTG
ACCGAGACTTACCGTATCAGCAGTACACCGACGGTAATCGTCGGCGGGAAGTATAAGCTTGAGTTTCCCAACGGCTACGC
GCAAGGCATGAAAACTGTGGACGAATTAATCATAAAAGTACGCAGCGAGCGCGGTTTGAAAAAACGCTGA

Domains


Predicted by InterproScan.

(85-179)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A220S3L2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

58.152

88.038

0.512

  dsbA2 Neisseria meningitidis MC58

57.692

87.081

0.502


Multiple sequence alignment