Detailed information NTG0237466

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CEW83_RS11605
• Genome accession: NZ_CP022187
• Coordinates: 2542346..2543710 (-)
• Length: 454 a.a.
• NCBI ID: WP_108949482.1
• Uniprot ID: A0A2U8GQ47
• Organism: Parazoarcus communis strain TSPY31
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2537346..2548710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEW83_RS11590 (CEW83_11580)	-	2538296..2539924 (-)	1629	WP_159099448.1	ArnT family glycosyltransferase	-
CEW83_RS11595 (CEW83_11585)	-	2539927..2540934 (-)	1008	WP_108949480.1	NAD-dependent epimerase	-
CEW83_RS11600 (CEW83_11590)	waaA	2541050..2542309 (+)	1260	WP_108949481.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
CEW83_RS11605 (CEW83_11595)	pilR	2542346..2543710 (-)	1365	WP_108949482.1	sigma-54-dependent transcriptional regulator	Regulator
CEW83_RS11610 (CEW83_11600)	-	2543707..2545263 (-)	1557	WP_108949483.1	sensor histidine kinase	-
CEW83_RS11615 (CEW83_11605)	-	2545266..2545502 (-)	237	WP_108949484.1	PP0621 family protein	-
CEW83_RS11620 (CEW83_11610)	-	2545642..2546802 (-)	1161	WP_108949485.1	pyridoxal phosphate-dependent aminotransferase	-
CEW83_RS11625 (CEW83_11615)	mtnA	2547021..2548091 (+)	1071	WP_108949486.1	S-methyl-5-thioribose-1-phosphate isomerase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49624.46 Da
• Isoelectric Point: 5.0951

>NTDB_id=237466 CEW83_RS11605 WP_108949482.1 2542346..2543710(-) (pilR) [Parazoarcus communis strain TSPY31]
MSVSDRRNRSASVDVLVIDDEEDIRELLELSLMRMGLGCDAAGTVAEARTLLEGRRYRLCLTDMRLPDGDGLELVEHIQR
QCPGLPVAVITAFGSIETAIRALKVGAFDFVTKPVELKALRELVTHALKLQAPSDAAQGEGGRKLIGTSAALAQLRGQVE
KLARNQAPVFIHGESGTGKEVIARLIHSLGARAAAPFVPVNCGAISPELMESEFFGHRKGSFTGAATDKEGLFQAANGGT
LFLDEVGELPLSMQVKLLRAIQERAVRPVGAHAEESVDVRILSASHRDLAQLVNENRFRQDLYFRINVITLRVPPLRERP
EDIPDLAAHVLGRLAEREGGAVRQLSPDALAALSGHSFPGNVRELENLLERACALCESDQITAADLDLQQCEGLTQTGLD
LDTGEDDDVADSDDERIKVLRALDENRWNRSAAARQLGMTLRQLRYRLQKWGMD

Nucleotide

• Length: 1365 bp

>NTDB_id=237466 CEW83_RS11605 WP_108949482.1 2542346..2543710(-) (pilR) [Parazoarcus communis strain TSPY31]
ATGAGCGTTTCAGATCGCCGTAACCGCAGTGCCAGCGTGGATGTGCTGGTGATCGATGACGAGGAAGACATCCGCGAACT
GCTCGAACTCTCGCTGATGCGCATGGGGCTGGGTTGCGATGCAGCTGGCACGGTGGCCGAAGCCAGGACCCTGCTCGAAG
GTCGCCGCTACCGGCTCTGCCTGACCGACATGCGACTGCCCGATGGCGACGGACTGGAGCTGGTCGAGCACATCCAGCGC
CAGTGCCCGGGCCTGCCGGTGGCCGTGATCACCGCCTTCGGCAGTATCGAGACCGCGATCCGTGCACTCAAGGTCGGTGC
CTTCGATTTCGTGACCAAGCCGGTCGAGCTCAAGGCCTTGCGCGAACTGGTCACGCACGCACTGAAGCTGCAGGCGCCGT
CGGACGCGGCGCAGGGTGAAGGCGGGCGCAAGCTGATCGGGACTTCGGCTGCGCTGGCGCAGTTGCGGGGGCAGGTCGAG
AAGCTGGCGCGCAATCAGGCGCCGGTATTCATCCATGGGGAGTCGGGTACGGGCAAGGAAGTGATCGCGCGCCTGATCCA
CAGCCTCGGTGCGCGGGCGGCTGCGCCCTTCGTGCCGGTAAACTGCGGTGCGATCTCGCCCGAGCTGATGGAGAGCGAGT
TCTTCGGTCATCGCAAGGGCAGCTTCACCGGTGCGGCGACCGACAAGGAGGGGCTGTTCCAGGCGGCCAACGGCGGCACC
CTGTTCCTCGACGAGGTCGGCGAGCTGCCCCTGTCGATGCAGGTCAAGCTCTTGCGCGCCATTCAGGAGCGCGCAGTGCG
CCCCGTCGGTGCGCATGCCGAGGAATCGGTCGATGTCCGCATCCTCTCGGCCTCCCACCGCGACCTCGCGCAGCTGGTGA
ACGAGAACCGCTTCCGTCAGGATCTCTACTTCCGCATCAACGTGATCACGCTGCGCGTGCCGCCATTGCGAGAGCGCCCG
GAAGACATCCCTGATCTCGCCGCACATGTGCTGGGACGGCTGGCCGAGCGTGAGGGCGGGGCGGTCAGGCAGCTGTCGCC
CGATGCGCTCGCAGCCCTCTCCGGGCACAGCTTTCCGGGCAATGTGCGCGAGCTGGAAAACCTGCTCGAGCGTGCCTGCG
CGCTGTGCGAATCCGACCAGATCACGGCTGCCGATCTCGACCTGCAGCAGTGCGAGGGGCTGACGCAGACGGGGCTCGAC
CTGGATACGGGCGAGGACGACGATGTGGCCGACTCGGACGACGAGCGCATCAAGGTCTTGCGTGCGCTCGACGAAAACCG
CTGGAACCGCTCTGCTGCGGCGCGCCAGCTCGGCATGACCTTGCGTCAGCTGCGCTACCGCCTGCAGAAATGGGGCATGG
ACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (145-311)

• Response regulator receiver domain (Response_reg) (15-124)

• Bacterial regulatory protein, Fis family (HTH_8) (415-451)

3D structure

• AlphaFold DB: A0A2U8GQ47

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.317	97.137	0.586
pilR	Acinetobacter baumannii strain A118	47.609	100	0.482