Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SPS_RS00600 | Genome accession | NC_004606 |
| Coordinates | 98838..99122 (+) | Length | 94 a.a. |
| NCBI ID | WP_002987779.1 | Uniprot ID | A0A0H2USY2 |
| Organism | Streptococcus pyogenes SSI-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 93838..104122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPS_RS00575 (SPs0078) | - | 95784..96149 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| SPS_RS00580 (SPs0079) | comGA | 96242..97180 (+) | 939 | WP_011054114.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPS_RS00585 (SPs0080) | comGB | 97116..98150 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPS_RS00590 (SPs0081) | comGC | 98152..98478 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SPS_RS00595 (SPs0082) | comGD | 98453..98881 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPS_RS00600 (SPs0083) | comGE | 98838..99122 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPS_RS00605 (SPs0084) | comGF | 99115..99549 (+) | 435 | WP_002992738.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPS_RS00610 (SPs0085) | comGG | 99533..99859 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| SPS_RS00615 (SPs0086) | comGH | 99957..100910 (+) | 954 | WP_011054117.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPS_RS00620 (SPs0087) | - | 100969..102165 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| SPS_RS00625 (SPs0088) | - | 102366..102674 (+) | 309 | WP_011054118.1 | hypothetical protein | - |
| SPS_RS00630 (SPs0089) | proC | 102757..103527 (-) | 771 | WP_002992745.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10672.62 Da Isoelectric Point: 8.9043
>NTDB_id=23452 SPS_RS00600 WP_002987779.1 98838..99122(+) (comGE) [Streptococcus pyogenes SSI-1]
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
MGIIKKQVKAYIALESMIATGILFSIVILVLSSLQQSQAALTYYRKQQEKLNLALMAVQTRTKEMTLNGCHITILRTDRY
ISIHDDEGEVMKIE
Nucleotide
Download Length: 285 bp
>NTDB_id=23452 SPS_RS00600 WP_002987779.1 98838..99122(+) (comGE) [Streptococcus pyogenes SSI-1]
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTGAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
GTGGGAATTATCAAAAAACAAGTCAAAGCTTACATAGCCCTTGAAAGTATGATCGCAACAGGCATCCTCTTTAGTATTGT
CATTCTCGTCTTGAGCAGTTTACAGCAGAGTCAGGCTGCTCTAACGTACTATCGAAAGCAGCAAGAAAAGCTTAATCTAG
CCTTGATGGCAGTACAAACTAGAACTAAAGAGATGACATTGAATGGTTGTCATATTACTATTTTACGTACGGATAGATAC
ATTAGTATTCACGATGACGAAGGAGAAGTGATGAAGATTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
38.298 |
100 |
0.383 |