Detailed information NTG0230799

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BtSCAC15_RS27830
• Genome accession: NZ_CP021436
• Coordinates: 5312385..5313734 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225362.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain C15
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5307385..5318734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BtSCAC15_RS27810 (BtSCAC15_28480)	secA	5307710..5310217 (-)	2508	WP_000579390.1	preprotein translocase subunit SecA	-
BtSCAC15_RS27815 (BtSCAC15_28485)	raiA	5310492..5311034 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
BtSCAC15_RS27820 (BtSCAC15_28490)	cspC	5311357..5311554 (-)	198	WP_001990088.1	cold shock protein CspC	-
BtSCAC15_RS27825 (BtSCAC15_28495)	-	5311681..5312385 (-)	705	WP_013142274.1	ComF family protein	-
BtSCAC15_RS27830 (BtSCAC15_28500)	comFA	5312385..5313734 (-)	1350	WP_000225362.1	ATP-dependent helicase ComFA	Machinery gene
BtSCAC15_RS27835 (BtSCAC15_28505)	-	5313862..5315289 (-)	1428	WP_000499474.1	C40 family peptidase	-
BtSCAC15_RS27840 (BtSCAC15_28510)	-	5315438..5315752 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
BtSCAC15_RS27845 (BtSCAC15_28520)	-	5315925..5316767 (-)	843	WP_000684725.1	DegV family protein	-
BtSCAC15_RS27850 (BtSCAC15_28525)	-	5317004..5317639 (+)	636	WP_127064194.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51174.04 Da
• Isoelectric Point: 9.9910

>NTDB_id=230799 BtSCAC15_RS27830 WP_000225362.1 5312385..5313734(-) (comFA) [Bacillus thuringiensis strain C15]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=230799 BtSCAC15_RS27830 WP_000225362.1 5312385..5313734(-) (comFA) [Bacillus thuringiensis strain C15]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49