Detailed information NTG0230657

Bioinformatically predicted

Overview

• Name: pilY1
• Type: Machinery gene
• Locus tag: CCK83_RS04595
• Genome accession: NZ_CP021428
• Coordinates: 951883..955737 (-)
• Length: 1284 a.a.
• NCBI ID: WP_213062791.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUMV-6483
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 946883..960737

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCK83_RS04560	lip	947621..948562 (+)	942	WP_087400193.1	lipase family alpha/beta hydrolase	-
CCK83_RS04565	rplS	948615..948983 (-)	369	WP_002116654.1	50S ribosomal protein L19	-
CCK83_RS04570	trmD	949203..949958 (-)	756	WP_002116964.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
CCK83_RS04575	rimM	950001..950549 (-)	549	WP_002116736.1	ribosome maturation factor RimM	-
CCK83_RS04580	rpsP	950569..950820 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
CCK83_RS04585	pilE	950968..951393 (-)	426	WP_014207809.1	type IV pilin protein	Machinery gene
CCK83_RS04590	pilY2	951390..951872 (-)	483	WP_017400484.1	type IV pilin protein	Machinery gene
CCK83_RS04595	pilY1	951883..955737 (-)	3855	WP_213062791.1	PilC/PilY family type IV pilus protein	Machinery gene
CCK83_RS04600	pilX	955749..956558 (-)	810	WP_017481716.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
CCK83_RS04605	pilW	956555..957556 (-)	1002	WP_017481717.1	PilW family protein	Machinery gene
CCK83_RS04610	pilV	957556..958116 (-)	561	WP_078219781.1	type IV pilus modification protein PilV	Machinery gene
CCK83_RS04615	fimU	958110..958583 (-)	474	WP_005067119.1	pilus assembly FimT family protein	Machinery gene
CCK83_RS04620	ispH	958753..959703 (-)	951	WP_032006348.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	-
CCK83_RS04625	gmk	959826..960455 (+)	630	WP_005804544.1	guanylate kinase	-

Sequence

Protein

• Length: 1284 a.a.
• Molecular weight: 137984.49 Da
• Isoelectric Point: 7.5995

>NTDB_id=230657 CCK83_RS04595 WP_213062791.1 951883..955737(-) (pilY1) [Acinetobacter pittii strain HUMV-6483]
MKLKLKNFKPNNLWYAICSSSVAFTWLMTSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTNNSYGENRLAMLKNGMNA
FLASNNPVLNDTRVGLGNFSANGDSRSGQVLVAAAPLGDASTLNTVGSQRYKLKQAVANLTAGGSTPSAHAYAEAAAYLM
GTTTYSEANYAIRKDSYIKRVRKSDNRTEYSYCTNYRDSQIDTTNLWQPCRSNSYWSNWSTSNPGVDTATAYDTSSDWTY
SYTYYYTTFNYAVANADSGIPKSKSNDTASNPNIVVDRNASNLNAIYQSPLPAVANRQSCDGQGIYFLSDGEPNNTTNTR
SATVMSTALGSTLGANFTCSGGLSNTTADSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSSLSSSDVKNACRLS
SRTQSDRKSDDNCSPNQTTNAVAAPGYGNGGFFPTQSAQGVTDSVIAFINNLDKVPLEPLTTGAISVPYDALNPKNLQEY
GYLRAFEPNPANTYLTWRGNLKKYHVVLSGTNAGAFEANTGGLVYNATGAFRTGTKDYWNSSTYNDGGKVFFGGSYAKVP
LPIAGQNETRDEEGNITKYYYAVQTKIRNLFTDVSAVAADGSLTKISTSGTNLLKIPATPPEGTNPFDSVANTASYVLGK
FNASTGQDILKAFPISLKLKILNYLGYSTDISATTLPSSLVTSNEPYLSMGGSIHSLPVQLTYNGTLDENGDLTSAREQS
ILYGTMEGGLHIVDASTGVEQMAFVPADILNDPVASKALVVGQSDATAPAHGMDGAWVSDPAYSITTTGSGSSAVSKVTA
KQMNIYGGMRMGGSSYYGLNVLNPASPKLLFRVGADQTDYSRMGQSWSKPVLANIRYNGVIKRVMIVGGGYDQCYENPNI
TLSNSCFTNGKAKGNAVYIIDVKTGERLWWTSDTGSNIDNSNMKHSIVSRISTLDRDADGLVDHLYFGDLGGQIFRIDLN
NNQTKTNSTYSSFGIRVVRLANLATNDSTYDASNDYTAGNAPRFYEPPTVTIHDYGIRTFITVGIASGDRSTPLDVYPLT
GREGMSPSTALSGRPVNNVYGIIDKDFIKKNLMSLTDSQLETKDITRSTLRKNPQILRSGETRVAQIFFPNTGVGQSGWY
RSLSSMSDGTEKANNSFRIKGGLKAFEEPMAVTGTLIVPVYDPQGTGIVAADPCLPRVVGETDQQTFCLPFGACLNSDGS
IDQNKENGSGFKTQTGTNCPVGASECNKNVIGSGIRGIAFVPKRDEPPVTNSCGKLQLSGNESGTGEWQCTSHLVPTRWY
ERYR

Nucleotide

• Length: 3855 bp

>NTDB_id=230657 CCK83_RS04595 WP_213062791.1 951883..955737(-) (pilY1) [Acinetobacter pittii strain HUMV-6483]
GTGAAACTAAAATTGAAGAATTTTAAGCCAAATAATTTATGGTATGCCATCTGTTCGAGTTCAGTTGCTTTTACATGGCT
AATGACAAGCTCCGTTGTGCAGGCGAGTGATTTACAAATTTATGCTTCACCTACAGCTGGTAAAAAAACTATTGTGATGA
TGTTGGATACATCAGGAAGTATGACCAACAATAGTTATGGCGAAAACCGTCTGGCCATGCTTAAAAATGGTATGAATGCT
TTTTTAGCAAGTAATAATCCTGTTTTAAATGACACTCGTGTGGGGTTGGGAAATTTCTCTGCAAATGGTGATAGCCGAAG
TGGGCAGGTTTTAGTGGCTGCTGCTCCTTTAGGAGATGCGAGTACGTTAAATACAGTGGGTTCTCAACGTTATAAATTAA
AACAGGCTGTTGCAAATTTAACTGCTGGCGGGTCAACGCCTTCAGCACATGCTTATGCGGAAGCTGCTGCTTATTTGATG
GGTACAACGACCTATTCAGAGGCGAATTATGCTATCCGAAAAGATAGCTATATAAAGCGTGTGCGAAAATCTGATAATAG
AACGGAATACTCATATTGTACGAATTATCGCGATTCACAAATCGATACCACAAATCTATGGCAACCTTGTCGCTCTAATA
GCTATTGGAGTAACTGGTCAACTTCTAATCCGGGTGTGGATACGGCAACTGCTTATGATACTTCGTCGGATTGGACCTAT
TCTTATACTTATTACTACACCACCTTTAATTATGCTGTAGCAAATGCAGATAGTGGTATCCCAAAATCAAAATCAAATGA
TACAGCTAGCAATCCGAATATTGTTGTAGATAGAAATGCCTCCAATTTAAATGCTATTTACCAATCTCCTTTACCTGCAG
TGGCCAATCGCCAGAGTTGTGATGGGCAAGGAATCTACTTTTTATCAGATGGGGAGCCGAACAATACAACAAATACACGT
TCGGCAACCGTGATGTCGACAGCCCTGGGCAGCACTTTGGGAGCAAATTTTACTTGTTCTGGAGGTTTGTCTAACACGAC
AGCAGACTCTGGTTGGGCCTGTATGGGGGAATTTGCAAAAAGATTATTTGATAAAACAAAAAACCCAGCTGGAGTTTCTA
TTCAAACAGCATTTGTCGGTTTTGGTAGTGACTTTTCTAGTTTAAGTTCTTCTGATGTAAAAAATGCCTGTCGTTTAAGT
TCGAGAACCCAATCTGATCGTAAAAGTGATGATAATTGTTCGCCGAATCAGACCACAAATGCGGTCGCTGCACCAGGTTA
TGGAAATGGAGGATTTTTCCCTACCCAAAGTGCGCAAGGTGTAACAGATAGTGTTATCGCATTTATTAATAATTTAGATA
AAGTTCCTTTAGAACCCTTAACCACAGGTGCTATCTCTGTTCCTTATGATGCACTAAATCCTAAAAATTTACAGGAATAT
GGTTACTTACGTGCTTTTGAGCCAAACCCGGCTAACACCTACTTAACATGGCGAGGAAATTTAAAGAAATATCATGTTGT
TTTATCGGGAACAAATGCTGGTGCTTTTGAAGCTAATACTGGTGGGTTGGTTTACAACGCAACTGGGGCATTTAGAACGG
GTACGAAAGATTATTGGAATAGCTCTACTTATAATGATGGAGGTAAAGTCTTTTTTGGTGGTTCATATGCAAAAGTTCCT
TTACCAATTGCTGGACAAAATGAAACACGTGATGAAGAAGGAAATATCACAAAATATTATTACGCAGTACAAACTAAAAT
CCGCAACTTATTTACTGATGTTTCCGCTGTTGCGGCGGATGGTAGCTTAACGAAAATATCGACTTCTGGAACTAATTTAC
TAAAAATTCCAGCTACTCCACCAGAAGGAACTAATCCTTTTGATAGTGTGGCTAATACAGCAAGTTATGTTTTAGGAAAA
TTTAATGCATCAACTGGACAAGATATTTTAAAAGCTTTCCCAATTAGCTTGAAATTAAAAATATTAAATTATCTAGGTTA
CTCAACTGATATTAGCGCTACGACTTTACCTTCGTCATTAGTTACATCGAATGAACCATATTTATCGATGGGCGGTAGTA
TTCACTCTTTACCGGTACAGCTTACCTATAATGGAACATTAGATGAAAATGGGGATTTAACATCTGCGCGTGAACAATCC
ATTCTCTATGGAACGATGGAAGGTGGTCTGCATATTGTGGATGCCTCAACTGGTGTAGAACAAATGGCTTTCGTTCCTGC
CGATATATTAAATGATCCAGTTGCATCAAAAGCTTTAGTGGTTGGCCAAAGTGATGCTACAGCTCCTGCTCACGGTATGG
ATGGGGCTTGGGTATCTGACCCTGCATATAGTATTACTACAACAGGAAGCGGTAGTTCAGCAGTATCAAAAGTAACTGCA
AAGCAAATGAATATTTATGGTGGCATGCGAATGGGGGGCAGCAGCTATTATGGCTTAAATGTCTTAAATCCTGCTTCACC
TAAGCTTCTCTTTAGAGTAGGAGCAGATCAAACTGATTATAGTCGTATGGGGCAGAGTTGGTCTAAACCTGTACTTGCAA
ATATACGTTATAACGGAGTTATTAAACGGGTTATGATTGTTGGTGGTGGCTACGACCAATGTTATGAAAACCCGAATATT
ACCTTGAGTAATTCTTGCTTTACGAATGGAAAAGCAAAAGGGAATGCTGTTTATATTATTGATGTTAAAACTGGGGAACG
CTTATGGTGGACTAGTGATACAGGCTCTAATATAGATAACTCTAATATGAAGCACAGTATTGTTAGTCGCATTAGTACCT
TAGATCGAGATGCTGATGGTTTAGTCGACCATTTATATTTTGGCGATTTAGGCGGACAAATTTTCCGTATCGATCTTAAT
AATAACCAGACAAAAACAAATTCAACTTATAGCAGTTTCGGTATTCGAGTTGTTCGATTAGCGAATTTAGCAACAAATGA
CTCAACTTATGATGCTTCGAATGACTATACCGCTGGGAATGCGCCGCGTTTTTATGAACCGCCAACAGTGACAATTCACG
ATTATGGAATCCGCACTTTTATTACTGTAGGTATTGCTTCAGGTGACCGTAGTACACCTTTAGATGTTTATCCGCTTACA
GGTCGTGAGGGGATGTCACCAAGTACAGCATTAAGCGGAAGACCTGTAAACAACGTTTATGGAATTATCGATAAAGACTT
TATTAAAAAGAATTTAATGTCTTTGACTGATAGCCAGCTTGAAACAAAAGATATTACTCGATCGACGCTTCGAAAAAATC
CACAAATTTTACGATCTGGGGAAACACGAGTAGCACAGATTTTCTTTCCAAACACTGGGGTGGGGCAAAGTGGTTGGTAT
CGCTCACTTTCTAGTATGAGCGATGGCACAGAGAAAGCTAATAATAGTTTCCGTATTAAAGGTGGACTGAAAGCTTTTGA
AGAACCTATGGCCGTTACGGGGACTTTAATTGTGCCTGTTTATGATCCGCAGGGAACAGGCATTGTAGCGGCAGACCCAT
GTTTACCACGTGTAGTAGGTGAAACTGACCAGCAGACGTTCTGTTTACCATTTGGCGCCTGCCTTAATTCTGATGGGTCA
ATTGATCAAAATAAAGAGAATGGAAGTGGATTCAAAACACAAACTGGTACTAATTGCCCAGTAGGAGCTTCTGAATGTAA
TAAAAATGTTATTGGCTCCGGTATTCGTGGCATAGCATTTGTTCCAAAAAGAGATGAACCTCCAGTGACTAATAGTTGTG
GGAAATTACAACTGTCTGGAAACGAGAGTGGAACGGGCGAGTGGCAGTGTACAAGTCATTTAGTTCCTACACGCTGGTAT
GAGCGTTATCGCTAA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (714-965)

• von Willebrand factor type A domain (VWA_2) (51-161)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY1	Acinetobacter baumannii D1279779	85.194	100	0.856