Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | CCK83_RS04610 | Genome accession | NZ_CP021428 |
| Coordinates | 957556..958116 (-) | Length | 186 a.a. |
| NCBI ID | WP_078219781.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain HUMV-6483 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 952556..963116
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCK83_RS04600 | pilX | 955749..956558 (-) | 810 | WP_017481716.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCK83_RS04605 | pilW | 956555..957556 (-) | 1002 | WP_017481717.1 | PilW family protein | Machinery gene |
| CCK83_RS04610 | pilV | 957556..958116 (-) | 561 | WP_078219781.1 | type IV pilus modification protein PilV | Machinery gene |
| CCK83_RS04615 | fimU | 958110..958583 (-) | 474 | WP_005067119.1 | pilus assembly FimT family protein | Machinery gene |
| CCK83_RS04620 | ispH | 958753..959703 (-) | 951 | WP_032006348.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CCK83_RS04625 | gmk | 959826..960455 (+) | 630 | WP_005804544.1 | guanylate kinase | - |
| CCK83_RS04630 | rpoZ | 960528..960806 (+) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| CCK83_RS20615 | - | 960845..961000 (+) | 156 | WP_014207816.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 19853.88 Da Isoelectric Point: 7.9110
>NTDB_id=230660 CCK83_RS04610 WP_078219781.1 957556..958116(-) (pilV) [Acinetobacter pittii strain HUMV-6483]
MLMQGSKQKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNAACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
MLMQGSKQKAQVGVGLLEVLVALILIAIGVLGYVALQVRAMDASSEALSKSQAIMIMRGLAENIRVNSSQASQYPAFVRS
YSNYSSTTAAPTLCFNAACTPSQLAQFDAYQAARNADQLGMKITMTNCPGVTSTMAQQRQCLFVFWGKTAPVITTNEGVT
SADVSSCMSTNGVYVNNSNCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=230660 CCK83_RS04610 WP_078219781.1 957556..958116(-) (pilV) [Acinetobacter pittii strain HUMV-6483]
ATGTTAATGCAGGGCTCTAAACAAAAGGCTCAAGTTGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTCCGTGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAGTATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATGCAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATTACAATGACAAATTGCCCAGGGGTTACAAGCA
CAATGGCCCAGCAGAGGCAATGTTTGTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
ATGTTAATGCAGGGCTCTAAACAAAAGGCTCAAGTTGGGGTGGGTTTATTAGAAGTGTTGGTTGCCTTAATTTTAATTGC
GATAGGGGTTTTAGGATATGTTGCCTTGCAAGTCCGTGCTATGGATGCTTCTTCAGAGGCATTAAGCAAATCTCAAGCGA
TTATGATCATGAGAGGATTAGCAGAAAACATTCGCGTAAATAGTTCTCAAGCTAGTCAGTATCCCGCATTTGTCCGTAGT
TATAGCAATTATTCATCTACCACCGCAGCTCCTACGTTGTGTTTCAATGCAGCTTGTACACCTTCTCAGCTTGCCCAATT
TGATGCATATCAAGCAGCAAGAAATGCTGATCAACTTGGCATGAAAATTACAATGACAAATTGCCCAGGGGTTACAAGCA
CAATGGCCCAGCAGAGGCAATGTTTGTTTGTTTTTTGGGGAAAAACCGCTCCAGTAATTACAACAAATGAGGGAGTCACG
AGCGCGGATGTGTCGAGCTGTATGAGTACAAATGGCGTTTATGTCAATAATTCGAACTGTTTAATGATGGAGGCATATTA
A
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
84.409 |
100 |
0.844 |