Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BC_RS27300 | Genome accession | NC_004722 |
| Coordinates | 5398259..5398771 (-) | Length | 170 a.a. |
| NCBI ID | WP_000981966.1 | Uniprot ID | A0A0A3WKS9 |
| Organism | Bacillus cereus ATCC 14579 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5393259..5403771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BC_RS27280 (BC5471) | rplI | 5394470..5394916 (-) | 447 | WP_000864228.1 | 50S ribosomal protein L9 | - |
| BC_RS27285 (BC5472) | - | 5394913..5396886 (-) | 1974 | WP_001113783.1 | DHH family phosphoesterase | - |
| BC_RS27290 (BC5473) | - | 5396965..5397900 (-) | 936 | WP_000814840.1 | YybS family protein | - |
| BC_RS27295 (BC5474) | rpsR | 5397980..5398213 (-) | 234 | WP_000918873.1 | 30S ribosomal protein S18 | - |
| BC_RS27300 (BC5475) | ssbA | 5398259..5398771 (-) | 513 | WP_000981966.1 | single-stranded DNA-binding protein | Machinery gene |
| BC_RS27305 (BC5476) | rpsF | 5398798..5399088 (-) | 291 | WP_001233778.1 | 30S ribosomal protein S6 | - |
| BC_RS27310 (BC5477) | ychF | 5399280..5400380 (-) | 1101 | WP_000524657.1 | redox-regulated ATPase YchF | - |
| BC_RS27315 (BC5478) | - | 5400496..5400693 (-) | 198 | WP_000435485.1 | DUF951 domain-containing protein | - |
| BC_RS27320 (BC5479) | - | 5400714..5401595 (-) | 882 | WP_000364812.1 | mechanosensitive ion channel family protein | - |
| BC_RS27325 (BC5480) | yyaC | 5401855..5402451 (+) | 597 | WP_001020714.1 | spore protease YyaC | - |
| BC_RS27330 (BC5481) | spo0J | 5402472..5403323 (-) | 852 | WP_001051832.1 | stage 0 sporulation protein Spo0J | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18494.29 Da Isoelectric Point: 4.9327
>NTDB_id=22946 BC_RS27300 WP_000981966.1 5398259..5398771(-) (ssbA) [Bacillus cereus ATCC 14579]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=22946 BC_RS27300 WP_000981966.1 5398259..5398771(-) (ssbA) [Bacillus cereus ATCC 14579]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGGCGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTCGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAGCAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGGCGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.571 |
100 |
0.747 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
62.353 |
0.406 |
| ssb | Glaesserella parasuis strain SC1401 |
37.43 |
100 |
0.394 |