Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   B7L44_RS17430 Genome accession   NZ_CP020588
Coordinates   3565040..3565450 (-) Length   136 a.a.
NCBI ID   WP_083009184.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain SSA3     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3560040..3570450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L44_RS17400 (B7L44_17400) - 3560125..3560394 (-) 270 WP_021510640.1 HPr family phosphocarrier protein -
  B7L44_RS17405 (B7L44_17405) rapZ 3560391..3561242 (-) 852 WP_002054547.1 RNase adapter RapZ -
  B7L44_RS17410 (B7L44_17410) panC 3561265..3562113 (-) 849 WP_002054580.1 pantoate--beta-alanine ligase -
  B7L44_RS17415 (B7L44_17415) panB 3562117..3562926 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  B7L44_RS17420 (B7L44_17420) folK 3562972..3563454 (-) 483 WP_083009183.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  B7L44_RS17425 (B7L44_17425) pcnB 3563451..3564914 (-) 1464 WP_004710567.1 polynucleotide adenylyltransferase PcnB -
  B7L44_RS17430 (B7L44_17430) comEA 3565040..3565450 (-) 411 WP_083009184.1 ComEA family DNA-binding protein Machinery gene
  B7L44_RS17435 (B7L44_17435) mazG 3565419..3566225 (-) 807 WP_083009185.1 nucleoside triphosphate pyrophosphohydrolase -
  B7L44_RS17440 (B7L44_17440) - 3566338..3567111 (+) 774 WP_083009186.1 SDR family oxidoreductase -
  B7L44_RS17445 (B7L44_17445) - 3567157..3569463 (-) 2307 WP_002054537.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15510.85 Da        Isoelectric Point: 10.2944

>NTDB_id=224565 B7L44_RS17430 WP_083009184.1 3565040..3565450(-) (comEA) [Acinetobacter nosocomialis strain SSA3]
MRYSMILWKNNCFILMMLCLGVISPSVFAQSFDQNFQEWKAKQQMYDQKLNVSKSSHSYGSKISQTNSLNDSTGQIHLNQ
ATVNEFRQLKGIGEKKAQAIVEYRQKNGGFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=224565 B7L44_RS17430 WP_083009184.1 3565040..3565450(-) (comEA) [Acinetobacter nosocomialis strain SSA3]
ATGCGATACAGCATGATACTTTGGAAAAATAATTGTTTTATTTTAATGATGTTGTGCTTAGGTGTGATTTCACCTTCGGT
TTTTGCTCAATCGTTTGATCAGAATTTTCAGGAATGGAAGGCTAAACAGCAGATGTACGACCAAAAGTTAAACGTCTCTA
AGTCTTCTCATTCTTATGGTTCTAAAATTTCTCAAACAAACAGTTTAAATGATTCTACTGGGCAGATTCATTTAAATCAG
GCGACTGTAAATGAGTTTCGGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTGGAATACAGACAAAAGAA
TGGTGGTTTTAAAAATATTGATGAAATTAAAAACGTCAAAGGAATCGGACCCGCTATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

86.765

100

0.868
  comEA Acinetobacter baumannii D1279779

86.765

100

0.868
  comEA Acinetobacter baylyi ADP1

48.649

81.618

0.397

Multiple sequence alignment