Detailed information NTG0224078

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: B7C51_RS11945
• Genome accession: NZ_CP020557
• Coordinates: 2244041..2244508 (-)
• Length: 155 a.a.
• NCBI ID: WP_036655661.1
• Uniprot ID: A0AAP5JTP9
• Organism: Paenibacillus larvae subsp. pulvifaciens strain SAG 10367
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2239041..2249508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7C51_RS11920 (B7C51_11920)	-	2239717..2240052 (-)	336	WP_083040078.1	hypothetical protein	-
B7C51_RS11925 (B7C51_11925)	-	2240290..2240622 (+)	333	WP_023482396.1	PadR family transcriptional regulator	-
B7C51_RS11930 (B7C51_11930)	-	2240619..2241068 (+)	450	WP_158530367.1	hypothetical protein	-
B7C51_RS29010	-	2241359..2241457 (+)	99	WP_367869928.1	hypothetical protein	-
B7C51_RS26655	-	2241482..2241583 (+)	102	Protein_2389	helix-turn-helix domain-containing protein	-
B7C51_RS11935 (B7C51_11935)	-	2242503..2243156 (+)	654	WP_083040082.1	type 1 glutamine amidotransferase domain-containing protein	-
B7C51_RS27390	-	2243171..2243435 (-)	265	Protein_2391	NCS2 family permease	-
B7C51_RS11940 (B7C51_11940)	rpsR	2243715..2244017 (-)	303	WP_023482399.1	30S ribosomal protein S18	-
B7C51_RS11945 (B7C51_11945)	ssbA	2244041..2244508 (-)	468	WP_036655661.1	single-stranded DNA-binding protein	Machinery gene
B7C51_RS11950 (B7C51_11950)	rpsF	2244552..2244839 (-)	288	WP_023482401.1	30S ribosomal protein S6	-
B7C51_RS11955 (B7C51_11955)	-	2245041..2245226 (+)	186	WP_023482402.1	YjzC family protein	-
B7C51_RS11960 (B7C51_11960)	-	2245232..2245495 (+)	264	WP_036655664.1	hypothetical protein	-
B7C51_RS11970 (B7C51_11970)	-	2245798..2246007 (-)	210	WP_023482403.1	DUF951 domain-containing protein	-
B7C51_RS11975 (B7C51_11975)	-	2246009..2246899 (-)	891	WP_023482404.1	mechanosensitive ion channel family protein	-
B7C51_RS11980 (B7C51_11980)	-	2246939..2247190 (-)	252	WP_024095527.1	DUF3343 domain-containing protein	-
B7C51_RS11985 (B7C51_11985)	yyaC	2247288..2247905 (+)	618	WP_077996388.1	spore protease YyaC	-
B7C51_RS11990 (B7C51_11990)	-	2247877..2248359 (-)	483	WP_158225702.1	DUF4446 family protein	-

Sequence

Protein

• Length: 155 a.a.
• Molecular weight: 17554.35 Da
• Isoelectric Point: 4.8103

>NTDB_id=224078 B7C51_RS11945 WP_036655661.1 2244041..2244508(-) (ssbA) [Paenibacillus larvae subsp. pulvifaciens strain SAG 10367]
MLNRVILIGRLTRDPELRYTPSGVAVTQFTLAVDRPYMNQQTRERETDFINIVTWRQLAETCANYLRKGRLTAVEGRIQV
RNYENNEGRKVYVTEIVADNVRFLESNNAGNRNNDEGSYSNAGYGGGSRSGGSQQQDPFLDDSKPIDISDDDLPF

Nucleotide

• Length: 468 bp

>NTDB_id=224078 B7C51_RS11945 WP_036655661.1 2244041..2244508(-) (ssbA) [Paenibacillus larvae subsp. pulvifaciens strain SAG 10367]
TTGCTTAACCGTGTGATTCTGATCGGCAGGCTGACAAGAGACCCGGAATTGCGATACACTCCATCCGGTGTGGCTGTTAC
CCAATTTACCCTGGCGGTAGACCGTCCGTATATGAACCAGCAAACGCGTGAGCGGGAGACAGATTTCATTAATATCGTGA
CGTGGAGACAGCTGGCTGAGACTTGTGCCAACTACCTGCGGAAAGGCCGTTTGACGGCGGTAGAAGGAAGAATTCAAGTG
CGTAATTATGAGAACAATGAGGGCCGCAAAGTATACGTGACCGAAATTGTGGCTGATAATGTGCGGTTCCTTGAATCGAA
TAATGCCGGAAACCGCAATAACGACGAAGGGTCTTATTCTAATGCAGGATACGGTGGCGGAAGCCGAAGCGGTGGATCAC
AACAGCAAGATCCGTTCCTCGATGATAGCAAGCCGATTGATATTTCAGATGATGATTTGCCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-104)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	52.601	100	0.587
ssb	Latilactobacillus sakei subsp. sakei 23K	46.199	100	0.51
ssb	Neisseria gonorrhoeae MS11	36.158	100	0.413
ssb	Neisseria meningitidis MC58	36.158	100	0.413
ssbB	Bacillus subtilis subsp. subtilis str. 168	54.286	67.742	0.368
ssb	Glaesserella parasuis strain SC1401	31.638	100	0.361