Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   A6J53_RS01435 Genome accession   NZ_CP020401
Coordinates   242844..244340 (-) Length   498 a.a.
NCBI ID   WP_002256391.1    Uniprot ID   A0A378VT64
Organism   Neisseria meningitidis strain FDAARGOS_214     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 237844..249340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J53_RS01395 (A6J53_01380) mraZ 237859..238314 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  A6J53_RS01400 (A6J53_01385) - 238620..239810 (+) 1191 WP_050584817.1 class I SAM-dependent methyltransferase -
  A6J53_RS01420 (A6J53_01405) - 240392..241213 (-) 822 WP_002226074.1 undecaprenyl-diphosphate phosphatase -
  A6J53_RS01425 (A6J53_01410) dsbA1 241246..241890 (-) 645 WP_002226073.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J53_RS01430 (A6J53_01415) ftsN 241893..242738 (-) 846 WP_002236705.1 cell division protein FtsN -
  A6J53_RS01435 (A6J53_01420) comM 242844..244340 (-) 1497 WP_002256391.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  A6J53_RS01440 (A6J53_01425) - 244354..244674 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  A6J53_RS01450 (A6J53_01435) putP 245157..246683 (+) 1527 WP_002256390.1 sodium/proline symporter PutP -
  A6J53_RS15145 - 246773..246940 (-) 168 WP_009346312.1 hypothetical protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53572.62 Da        Isoelectric Point: 6.8995

>NTDB_id=222148 A6J53_RS01435 WP_002256391.1 242844..244340(-) (comM) [Neisseria meningitidis strain FDAARGOS_214]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLAEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPIKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSASVLERVIAARDKQYARQGKVNATLSVSELDTSARIQKEAQEALGGLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVMKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=222148 A6J53_RS01435 WP_002256391.1 242844..244340(-) (comM) [Neisseria meningitidis strain FDAARGOS_214]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCGCATTTCAACATCGTCGGGCTGCCCGATACGGAAGTAAAGGAAAGTCGCGACCGCGTCCGTGCCGCCATTA
TTCAAAGCGGTTTTGAATTCCCCGCCAAAAAAATTACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCTGCATCGGGGCAGGTTGCGCCCGAAAAACTGGCGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAATGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGAATGCCAAGTTCCTCAGATGCCGTTTGAACA
TGGCGGACAACCTGATTTGTGCGATGTGAAAGGTCAGCACACCGCGCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTCTTGATGATGGGTCCGCCGGGAACGGGCAAGTCTATGCTCTCCCAACGGCTGCCCGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTAGAAGTTTGGGCATTGCGTTCGCTCCTGCCCAACCACCAACAACAACTCGACAGCAACCGTCC
TTTCCGCAGTCCGCATCACAGCGCCAGCGCGGCGGCTATGGTCGGCGGCGGTTCGGATCCGCGTCCGGGCGAAATTTCAT
TGGCGCATCACGGCGTTTTATTTTTGGATGAATTGCCCGAGTTCGACCGCAAAGTTTTGGAAGTGTTGCGCGAACCTTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCGGCGAAATTCCAACTTGTTGCCGCCATGAA
CCCTTGTCCTTGCGGTTATCTCGGGCATCCCATCAAACCCTGCCGTTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGCA
AGATTTCCGGCCCGCTGCTCGACCGCATCGATTTGACCATCGAAGTCCCGAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCAGGGGAAAGCAGCGCGTCCGTTTTGGAACGCGTTATCGCCGCCAGAGACAAACAATACGCACGGCAAGGCAAAGT
GAATGCCACCTTGAGTGTCAGTGAACTCGACACATCCGCCCGCATTCAAAAAGAAGCGCAGGAAGCATTGGGCGGCCTGC
TGGAAAAACTCTCCCTTTCCGCCCGCAGCTTCCACCGCATTATGCGCGTGGCGCGTACATTGGCGGATTTGGCGGGCGAC
GAAGAAGTCGGCAGAAGCCACGTCATGAAAGCCATAGGTTTCCGCCGCGCTTTATAG

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378VT64

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

52.988

100

0.534
  comM Vibrio campbellii strain DS40M4

52.314

99.799

0.522
  comM Haemophilus influenzae Rd KW20

50.2

100

0.504
  comM Glaesserella parasuis strain SC1401

49.008

100

0.496
  comM Legionella pneumophila str. Paris

46.535

100

0.472
  comM Legionella pneumophila strain ERS1305867

46.535

100

0.472
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.829

100

0.438

Multiple sequence alignment