Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   A6J53_RS01425 Genome accession   NZ_CP020401
Coordinates   241246..241890 (-) Length   214 a.a.
NCBI ID   WP_002226073.1    Uniprot ID   A0A378VTS6
Organism   Neisseria meningitidis strain FDAARGOS_214     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 236246..246890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J53_RS01385 (A6J53_01370) ftsL 236616..236879 (-) 264 WP_002232818.1 cell division protein FtsL -
  A6J53_RS01390 (A6J53_01375) rsmH 236876..237862 (-) 987 WP_002237688.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  A6J53_RS01395 (A6J53_01380) mraZ 237859..238314 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  A6J53_RS01400 (A6J53_01385) - 238620..239810 (+) 1191 WP_050584817.1 class I SAM-dependent methyltransferase -
  A6J53_RS01420 (A6J53_01405) - 240392..241213 (-) 822 WP_002226074.1 undecaprenyl-diphosphate phosphatase -
  A6J53_RS01425 (A6J53_01410) dsbA1 241246..241890 (-) 645 WP_002226073.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6J53_RS01430 (A6J53_01415) ftsN 241893..242738 (-) 846 WP_002236705.1 cell division protein FtsN -
  A6J53_RS01435 (A6J53_01420) comM 242844..244340 (-) 1497 WP_002256391.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  A6J53_RS01440 (A6J53_01425) - 244354..244674 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  A6J53_RS01450 (A6J53_01435) putP 245157..246683 (+) 1527 WP_002256390.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23967.99 Da        Isoelectric Point: 9.8294

>NTDB_id=222147 A6J53_RS01425 WP_002226073.1 241246..241890(-) (dsbA1) [Neisseria meningitidis strain FDAARGOS_214]
MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=222147 A6J53_RS01425 WP_002226073.1 241246..241890(-) (dsbA1) [Neisseria meningitidis strain FDAARGOS_214]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378VTS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment