Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   CW339_RS02440 Genome accession   NZ_CP025216
Coordinates   453877..454683 (+) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain DGCC 7710     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 448877..459683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CW339_RS02420 (CW339_02420) tuf 449924..451120 (+) 1197 WP_002949971.1 elongation factor Tu -
  CW339_RS02425 (CW339_02425) tpiA 451369..452127 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  CW339_RS02430 (CW339_02430) tmk 452367..452996 (+) 630 WP_002946312.1 dTMP kinase -
  CW339_RS02435 (CW339_02435) - 453005..453880 (+) 876 WP_024704222.1 DNA polymerase III subunit delta' -
  CW339_RS02440 (CW339_02440) yaaT 453877..454683 (+) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  CW339_RS02445 (CW339_02445) yabA 454670..454990 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  CW339_RS02450 (CW339_02450) rsmI 454993..455859 (+) 867 WP_024704223.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CW339_RS02455 (CW339_02455) - 455996..457231 (+) 1236 WP_024704224.1 ammonium transporter -
  CW339_RS02460 (CW339_02460) - 457242..457583 (+) 342 WP_011680840.1 P-II family nitrogen regulator -
  CW339_RS02465 (CW339_02465) - 457681..458337 (+) 657 WP_011680841.1 glycoside hydrolase family 73 protein -
  CW339_RS02470 (CW339_02470) - 458360..459181 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  CW339_RS02475 (CW339_02475) - 459200..459671 (-) 472 Protein_439 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=217556 CW339_RS02440 WP_011680838.1 453877..454683(+) (yaaT) [Streptococcus thermophilus strain DGCC 7710]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=217556 CW339_RS02440 WP_011680838.1 453877..454683(+) (yaaT) [Streptococcus thermophilus strain DGCC 7710]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414

Multiple sequence alignment