Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   NMA_RS10570 Genome accession   NC_003116
Coordinates   2028669..2030165 (-) Length   498 a.a.
NCBI ID   WP_010981279.1    Uniprot ID   A0A0U1RKA1
Organism   Neisseria meningitidis Z2491     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 2023669..2035165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS10535 (NMA2075) mraZ 2023673..2024128 (-) 456 WP_002236706.1 division/cell wall cluster transcriptional repressor MraZ -
  NMA_RS10540 (NMA2076) - 2024434..2025624 (+) 1191 WP_162009331.1 class I SAM-dependent methyltransferase -
  NMA_RS10555 (NMA2077) - 2026199..2027020 (-) 822 WP_002220359.1 undecaprenyl-diphosphate phosphatase -
  NMA_RS10560 (NMA2078) dsbA1 2027053..2027697 (-) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMA_RS10565 (NMA2079) ftsN 2027700..2028563 (-) 864 WP_002229030.1 cell division protein FtsN -
  NMA_RS10570 (NMA2080) comM 2028669..2030165 (-) 1497 WP_010981279.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMA_RS10575 (NMA2081) - 2030179..2030499 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMA_RS10585 (NMA2083) putP 2030982..2032508 (+) 1527 WP_002224913.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53573.62 Da        Isoelectric Point: 6.8995

>NTDB_id=21662 NMA_RS10570 WP_010981279.1 2028669..2030165(-) (comM) [Neisseria meningitidis Z2491]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLAEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECQVPQMPFEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEALGGLMEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVMKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=21662 NMA_RS10570 WP_010981279.1 2028669..2030165(-) (comM) [Neisseria meningitidis Z2491]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCGCATTTCAACATCGTCGGGCTGCCCGATACGGAAGTAAAGGAAAGCCGCGACCGCGTCCGTGCCGCCATTA
TTCAAAGCGGTTTTGAATTCCCCGCCAAAAAAATTACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCCGCATCGGGGCAGGTTGCGCCCGAAAAACTGGCGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAACGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGAATGCCAAGTTCCTCAGATGCCGTTTGAACA
TGGCGGACAACCTGATTTGTGCGATGTGAAAGGTCAGCACACCGCGCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTCTTGATGATGGGTCCGCCGGGAACGGGCAAGTCTATGCTCTCCCAACGGCTGCCCGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTAGAAGTTTGGGCATTGCGTTCGCTCCTGCCCAACCACCAACAACAACTCGACAGCAACCGTCC
TTTCCGCAGTCCGCATCACAGCGCCAGCGCGGCGGCTATGGTCGGCGGCGGTTCGGATCCGCGTCCGGGCGAAATTTCAT
TGGCGCACCACGGCGTTTTGTTTTTGGACGAGCTGCCCGAGTTTGACCGCAAAGTTTTGGAAGTTTTGCGCGAACCGTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCTGCCAAATTCCAACTTGTTGCCGCCATGAA
CCCCTGCCCGTGCGGTTATCTCGGGCATCCCGTCAAACCCTGCCGCTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGCA
AGATTTCCGGGCCGCTGCTCGACCGCATCGATTTGACCATCGAAGTCCCCAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCGGGCGAAAGCAGCGCGTCCGTTTTGGAACGCGTTATCGCCGCCCGCGACAAACAATACGCACGGCAGGGCAAAGT
CAACGCCGCTTTGAGCGTCAGCGAACTCGATTCCCAAGCCCGCATTCAAAAAGAAGCGCAGGAAGCATTGGGCGGCCTGA
TGGAAAAACTCTCCCTTTCCGCCCGCAGCTTCCACCGCATTATGCGCGTGGCGCGTACATTGGCGGATTTGGCGGGCGAC
GAAGAAGTCGGCAGAAGCCACGTCATGAAAGCCATAGGTTTCCGTCGCGCTTTATAG

Domains

Predicted by InterproScan.

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RKA1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

52.789

100

0.532
  comM Vibrio campbellii strain DS40M4

52.113

99.799

0.52
  comM Haemophilus influenzae Rd KW20

49.699

100

0.498
  comM Glaesserella parasuis strain SC1401

48.81

100

0.494
  comM Legionella pneumophila str. Paris

46.733

100

0.474
  comM Legionella pneumophila strain ERS1305867

46.733

100

0.474
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.026

100

0.44

Multiple sequence alignment