Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMA_RS10560 Genome accession   NC_003116
Coordinates   2027053..2027697 (-) Length   214 a.a.
NCBI ID   WP_002220358.1    Uniprot ID   A0A0U1RK99
Organism   Neisseria meningitidis Z2491     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2022053..2032697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS10525 (NMA2073) ftsL 2022430..2022693 (-) 264 WP_002220363.1 cell division protein FtsL -
  NMA_RS10530 (NMA2074) rsmH 2022690..2023676 (-) 987 WP_002218781.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  NMA_RS10535 (NMA2075) mraZ 2023673..2024128 (-) 456 WP_002236706.1 division/cell wall cluster transcriptional repressor MraZ -
  NMA_RS10540 (NMA2076) - 2024434..2025624 (+) 1191 WP_162009331.1 class I SAM-dependent methyltransferase -
  NMA_RS10555 (NMA2077) - 2026199..2027020 (-) 822 WP_002220359.1 undecaprenyl-diphosphate phosphatase -
  NMA_RS10560 (NMA2078) dsbA1 2027053..2027697 (-) 645 WP_002220358.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMA_RS10565 (NMA2079) ftsN 2027700..2028563 (-) 864 WP_002229030.1 cell division protein FtsN -
  NMA_RS10570 (NMA2080) comM 2028669..2030165 (-) 1497 WP_010981279.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMA_RS10575 (NMA2081) - 2030179..2030499 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMA_RS10585 (NMA2083) putP 2030982..2032508 (+) 1527 WP_002224913.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23970.99 Da        Isoelectric Point: 10.0160

>NTDB_id=21661 NMA_RS10560 WP_002220358.1 2027053..2027697(-) (dsbA1) [Neisseria meningitidis Z2491]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQKQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVKLSGLKYQANPAVFKAVYEQKIRLENRSVAEKWALSQKGFDGKKLMRAYDSPAAAAAASKMQQ
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=21661 NMA_RS10560 WP_002220358.1 2027053..2027697(-) (dsbA1) [Neisseria meningitidis Z2491]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAAAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTAAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCAGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGAAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTACGACTCTCCTGCGGCAGCGGCTGCTGCATCAAAAATGCAGCAA
TTGACGGAACAGTACCGCATCGACAGTACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGTGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0U1RK99

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.851

87.85

0.491
  dsbA2 Neisseria meningitidis MC58

50.538

86.916

0.439

Multiple sequence alignment