Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | CWQ22_RS04050 | Genome accession | NZ_CP025027 |
| Coordinates | 728404..729000 (+) | Length | 198 a.a. |
| NCBI ID | WP_000966735.1 | Uniprot ID | Q3K1U0 |
| Organism | Streptococcus agalactiae strain SGEHI2015-107 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 723404..734000
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CWQ22_RS04035 (CWQ22_04035) | tpiA | 724588..725346 (+) | 759 | WP_000087883.1 | triose-phosphate isomerase | - |
| CWQ22_RS04040 (CWQ22_04040) | - | 725523..726215 (+) | 693 | WP_000240135.1 | phosphoglycerate mutase | - |
| CWQ22_RS04045 (CWQ22_04045) | pbp2b | 726344..728389 (+) | 2046 | WP_000934666.1 | penicillin-binding protein PBP2B | - |
| CWQ22_RS04050 (CWQ22_04050) | recR | 728404..729000 (+) | 597 | WP_000966735.1 | recombination mediator RecR | Machinery gene |
| CWQ22_RS04055 (CWQ22_04055) | - | 729141..730187 (+) | 1047 | WP_000032513.1 | D-alanine--D-alanine ligase | - |
| CWQ22_RS04060 (CWQ22_04060) | murF | 730334..731701 (+) | 1368 | WP_017647798.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| CWQ22_RS04065 (CWQ22_04065) | - | 731888..733108 (+) | 1221 | WP_000793481.1 | OFA family MFS transporter | - |
| CWQ22_RS04070 (CWQ22_04070) | - | 733237..733923 (+) | 687 | WP_000569006.1 | YwaF family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21619.82 Da Isoelectric Point: 4.5632
>NTDB_id=216291 CWQ22_RS04050 WP_000966735.1 728404..729000(+) (recR) [Streptococcus agalactiae strain SGEHI2015-107]
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=216291 CWQ22_RS04050 WP_000966735.1 728404..729000(+) (recR) [Streptococcus agalactiae strain SGEHI2015-107]
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
88.384 |
100 |
0.884 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
66.667 |
100 |
0.667 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |