Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   BUW91_RS25950 Genome accession   NZ_CP018874
Coordinates   5036849..5037910 (-) Length   353 a.a.
NCBI ID   WP_301337466.1    Uniprot ID   -
Organism   Priestia megaterium strain JX285     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 5031849..5042910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUW91_RS25930 (BUW91_25950) - 5032571..5034469 (+) 1899 WP_029319481.1 alkaline phosphatase PhoX -
  BUW91_RS25935 (BUW91_25955) - 5034886..5035884 (+) 999 WP_029319482.1 tRNA-dihydrouridine synthase -
  BUW91_RS25940 (BUW91_25960) rlmH 5036054..5036533 (-) 480 WP_013085547.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BUW91_RS25945 (BUW91_25965) - 5036617..5036775 (-) 159 WP_013059901.1 CxxH/CxxC protein -
  BUW91_RS25950 (BUW91_25970) htrA 5036849..5037910 (-) 1062 WP_301337466.1 trypsin-like peptidase domain-containing protein Regulator
  BUW91_RS25955 (BUW91_25975) - 5038138..5038932 (-) 795 WP_014457688.1 MBL fold metallo-hydrolase -
  BUW91_RS25960 (BUW91_25980) yycI 5038951..5039730 (-) 780 WP_029319486.1 two-component system regulatory protein YycI -
  BUW91_RS25965 (BUW91_25985) yycH 5039717..5041078 (-) 1362 WP_225049784.1 two-component system activity regulator YycH -

Sequence


Protein


Download         Length: 353 a.a.        Molecular weight: 37884.83 Da        Isoelectric Point: 5.1327

>NTDB_id=211246 BUW91_RS25950 WP_301337466.1 5036849..5037910(-) (htrA) [Priestia megaterium strain JX285]
MPDGWMTDENRDEQTGSTIQKSVSLDVTTAVTKAVSEANAAVVGVVNIQNSESFWNDERTDAGTGSGVIYKKQGNKAYIV
TNYHVIKGANEIEVSFSNGTRVSAKILGSDDLMDLAVLEIDAGHVTKVATFGNSDKLKAGEPVIAIGNPLGLQFSGSVTQ
GVVSGVNRVIPQDLNGDGNPDWQSEVIQTDAAINPGNSGGALVNIDGELIGINSMKIAQEAVEGIGLAIPINMARPIIND
LERYGEVRRPYLGVSTLSLSEVSGYHLKETLKLPHDVVNGVAVLKVEPGSPAAKAGLKEYDVIVELDHSKVRDIATLRKH
LYIEKEIGDKMNVTFYRDGKKKSTEVKLTRQMK

Nucleotide


Download         Length: 1062 bp        

>NTDB_id=211246 BUW91_RS25950 WP_301337466.1 5036849..5037910(-) (htrA) [Priestia megaterium strain JX285]
TTGCCAGATGGATGGATGACGGATGAAAATAGAGATGAACAAACGGGATCTACCATCCAAAAATCAGTATCTCTTGATGT
CACTACGGCCGTCACAAAAGCTGTTTCTGAAGCCAATGCAGCAGTTGTAGGAGTTGTAAACATTCAGAACTCTGAAAGCT
TTTGGAATGATGAACGAACTGATGCCGGAACGGGCTCAGGTGTTATTTACAAAAAGCAAGGCAACAAAGCTTATATTGTG
ACAAACTATCATGTCATTAAAGGCGCTAACGAAATTGAAGTGAGCTTCAGTAACGGTACAAGGGTATCGGCTAAAATTCT
TGGCAGCGATGATTTAATGGACTTAGCAGTTCTTGAAATTGACGCAGGCCACGTGACAAAAGTGGCTACCTTCGGAAATT
CTGATAAGCTTAAAGCTGGTGAACCAGTGATTGCTATCGGAAACCCGTTAGGCCTTCAATTTTCTGGCTCCGTTACACAA
GGAGTTGTCTCAGGGGTTAACCGTGTCATTCCTCAAGATTTGAATGGCGATGGAAACCCTGATTGGCAATCAGAAGTTAT
TCAAACAGATGCCGCCATTAACCCTGGTAATAGCGGGGGTGCTCTTGTTAATATTGATGGTGAATTAATCGGTATTAATT
CCATGAAAATTGCCCAAGAAGCAGTAGAAGGCATTGGTCTTGCCATTCCAATCAACATGGCTAGGCCCATTATTAATGAC
TTAGAACGATATGGTGAAGTCAGACGTCCGTATCTTGGAGTTAGTACACTATCATTAAGTGAGGTATCAGGGTATCATTT
AAAAGAAACCCTTAAGTTACCGCATGATGTAGTAAACGGAGTTGCTGTTCTAAAAGTCGAGCCAGGTTCGCCAGCCGCTA
AAGCCGGATTAAAGGAATATGATGTGATTGTTGAGTTAGATCACAGCAAAGTAAGGGACATTGCGACACTTCGCAAACAC
CTCTACATTGAAAAAGAAATTGGCGATAAAATGAACGTAACGTTCTATCGCGATGGCAAAAAGAAATCCACAGAAGTAAA
ATTAACGCGTCAAATGAAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

46.866

100

0.487

  htrA Streptococcus pneumoniae Rx1

44.277

94.051

0.416

  htrA Streptococcus pneumoniae D39

44.277

94.051

0.416

  htrA Streptococcus pneumoniae R6

44.277

94.051

0.416

  htrA Streptococcus pneumoniae TIGR4

44.277

94.051

0.416

  htrA Streptococcus mitis NCTC 12261

43.675

94.051

0.411

  htrA Streptococcus gordonii str. Challis substr. CH1

40.96

100

0.411


Multiple sequence alignment