Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BSQ33_RS14765 | Genome accession | NZ_CP018835 |
| Coordinates | 3237915..3238220 (+) | Length | 101 a.a. |
| NCBI ID | WP_021020077.1 | Uniprot ID | A0A1Z2SI26 |
| Organism | Vibrio gazogenes strain ATCC 43942 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3232915..3243220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSQ33_RS14755 (BSQ33_14805) | - | 3235405..3235677 (+) | 273 | WP_021020075.1 | HU family DNA-binding protein | - |
| BSQ33_RS14760 (BSQ33_14810) | ppiD | 3235927..3237780 (+) | 1854 | WP_088134415.1 | peptidylprolyl isomerase | - |
| BSQ33_RS14765 (BSQ33_14815) | comEA | 3237915..3238220 (+) | 306 | WP_021020077.1 | ComEA family DNA-binding protein | Machinery gene |
| BSQ33_RS14770 (BSQ33_14820) | - | 3238304..3240304 (-) | 2001 | WP_198298115.1 | hybrid sensor histidine kinase/response regulator | - |
| BSQ33_RS14775 (BSQ33_14825) | - | 3240861..3242033 (-) | 1173 | WP_232471984.1 | acyl-homoserine-lactone synthase | - |
| BSQ33_RS14780 (BSQ33_14830) | - | 3242306..3242566 (-) | 261 | WP_232471933.1 | response regulator | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 10718.47 Da Isoelectric Point: 5.7833
>NTDB_id=210790 BSQ33_RS14765 WP_021020077.1 3237915..3238220(+) (comEA) [Vibrio gazogenes strain ATCC 43942]
MLKLLLLSVLSVVCLPLQTVYAATGEPASVTPLESQANIVNINSATAEELATVLSGIGLKKAQALVNYREEHGPFAQVED
VTAVKGIGMSLVERNRSRISL
MLKLLLLSVLSVVCLPLQTVYAATGEPASVTPLESQANIVNINSATAEELATVLSGIGLKKAQALVNYREEHGPFAQVED
VTAVKGIGMSLVERNRSRISL
Nucleotide
Download Length: 306 bp
>NTDB_id=210790 BSQ33_RS14765 WP_021020077.1 3237915..3238220(+) (comEA) [Vibrio gazogenes strain ATCC 43942]
ATGCTTAAATTATTACTTCTTTCTGTACTTTCAGTTGTGTGTCTGCCACTACAAACGGTTTATGCTGCGACTGGTGAGCC
AGCTTCTGTTACACCTTTGGAAAGTCAGGCCAATATTGTCAATATCAACAGTGCAACAGCGGAAGAACTTGCCACAGTGC
TCAGCGGTATTGGTTTGAAAAAAGCACAGGCTCTCGTTAACTATCGAGAAGAACATGGGCCATTTGCTCAAGTAGAGGAT
GTGACAGCAGTCAAAGGGATCGGTATGTCGCTTGTTGAGAGGAACCGTAGTCGAATCAGCTTATAG
ATGCTTAAATTATTACTTCTTTCTGTACTTTCAGTTGTGTGTCTGCCACTACAAACGGTTTATGCTGCGACTGGTGAGCC
AGCTTCTGTTACACCTTTGGAAAGTCAGGCCAATATTGTCAATATCAACAGTGCAACAGCGGAAGAACTTGCCACAGTGC
TCAGCGGTATTGGTTTGAAAAAAGCACAGGCTCTCGTTAACTATCGAGAAGAACATGGGCCATTTGCTCAAGTAGAGGAT
GTGACAGCAGTCAAAGGGATCGGTATGTCGCTTGTTGAGAGGAACCGTAGTCGAATCAGCTTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
48.515 |
100 |
0.485 |
| comEA | Vibrio cholerae strain A1552 |
48.515 |
100 |
0.485 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40 |
100 |
0.436 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
39.796 |
97.03 |
0.386 |
| comEA | Vibrio campbellii strain DS40M4 |
61.29 |
61.386 |
0.376 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
59.677 |
61.386 |
0.366 |