Detailed information NTG0207059

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BSL056_RS20970
• Genome accession: NZ_CP018197
• Coordinates: 3409506..3410162 (-)
• Length: 218 a.a.
• NCBI ID: WP_238549993.1
• Uniprot ID: -
• Organism: Bacillus safensis strain KCTC 12796BP
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3404506..3415162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSL056_RS17650 (BSL056_17670)	fliW	3404644..3405078 (-)	435	WP_073207594.1	flagellar assembly protein FliW	-
BSL056_RS17655 (BSL056_17675)	-	3405107..3405685 (-)	579	WP_073207597.1	DUF6470 family protein	-
BSL056_RS17660 (BSL056_17680)	flgL	3405732..3406640 (-)	909	WP_024423617.1	flagellar hook-associated protein FlgL	-
BSL056_RS17665 (BSL056_17685)	flgK	3406650..3408170 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
BSL056_RS17670 (BSL056_17690)	-	3408186..3408668 (-)	483	WP_024423619.1	flagellar protein FlgN	-
BSL056_RS17675 (BSL056_17695)	flgM	3408687..3408950 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
BSL056_RS17680 (BSL056_17700)	-	3409030..3409449 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
BSL056_RS20970 (BSL056_17705)	comFC	3409506..3410162 (-)	657	WP_238549993.1	ComF family protein	Machinery gene
BSL056_RS17690 (BSL056_17710)	-	3410189..3410482 (-)	294	WP_024423623.1	competence protein ComFB	-
BSL056_RS17695 (BSL056_17715)	comFA	3410531..3411928 (-)	1398	WP_145925737.1	DEAD/DEAH box helicase	Machinery gene
BSL056_RS17700 (BSL056_17720)	-	3412049..3412891 (-)	843	WP_024423625.1	DegV family protein	-
BSL056_RS17705 (BSL056_17725)	degU	3413107..3413796 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BSL056_RS17710 (BSL056_17730)	degS	3413861..3415036 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24946.05 Da
• Isoelectric Point: 9.7972

>NTDB_id=207059 BSL056_RS20970 WP_238549993.1 3409506..3410162(-) (comFC) [Bacillus safensis strain KCTC 12796BP]
MPAFTWKSFLLLNDDRLCVACKNHLVKIEHPICPTCGRAQSNDQLCQDCNRWNERSDSIKILVKNRSVYTYNELMKDVLA
RFKFRGDTALAELFQKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=207059 BSL056_RS20970 WP_238549993.1 3409506..3410162(-) (comFC) [Bacillus safensis strain KCTC 12796BP]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGCCTTTGTGTAGCATGTAAGAATCACTTAGTGAA
GATTGAGCATCCTATTTGCCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTGTGCCAGGACTGTAACAGATGGAATG
AACGCTCTGATTCTATTAAAATCCTTGTAAAAAATAGGTCAGTTTATACTTACAACGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTCAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATTCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362