Detailed information NTG0207053

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BSL056_RS17710
• Genome accession: NZ_CP018197
• Coordinates: 3413861..3415036 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain KCTC 12796BP
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3408861..3420036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSL056_RS17680 (BSL056_17700)	-	3409030..3409449 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
BSL056_RS20970 (BSL056_17705)	comFC	3409506..3410162 (-)	657	WP_238549993.1	ComF family protein	Machinery gene
BSL056_RS17690 (BSL056_17710)	-	3410189..3410482 (-)	294	WP_024423623.1	competence protein ComFB	-
BSL056_RS17695 (BSL056_17715)	comFA	3410531..3411928 (-)	1398	WP_145925737.1	DEAD/DEAH box helicase	Machinery gene
BSL056_RS17700 (BSL056_17720)	-	3412049..3412891 (-)	843	WP_024423625.1	DegV family protein	-
BSL056_RS17705 (BSL056_17725)	degU	3413107..3413796 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BSL056_RS17710 (BSL056_17730)	degS	3413861..3415036 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
BSL056_RS17715 (BSL056_17735)	-	3415257..3415925 (+)	669	WP_012011434.1	YigZ family protein	-
BSL056_RS17720 (BSL056_17740)	-	3415910..3417001 (+)	1092	WP_024423626.1	LCP family protein	-
BSL056_RS17725 (BSL056_17745)	-	3417037..3418104 (-)	1068	WP_024423627.1	MraY family glycosyltransferase	-
BSL056_RS17730 (BSL056_17750)	-	3418239..3419435 (-)	1197	WP_024423628.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=207053 BSL056_RS17710 WP_003213166.1 3413861..3415036(-) (degS) [Bacillus safensis strain KCTC 12796BP]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=207053 BSL056_RS17710 WP_003213166.1 3413861..3415036(-) (degS) [Bacillus safensis strain KCTC 12796BP]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGAAGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCACAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGTATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterProScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841