Detailed information NTG0020413

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CT_650
• Genome accession: NC_000117
• Coordinates: 745340..746398 (+)
• Length: 352 a.a.
• NCBI ID: NP_220168.1
• Uniprot ID: P0CD80
• Organism: Chlamydia trachomatis D/UW-3/CX
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 740340..751398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CT_645	-	740921..741217 (-)	297	NP_220163.1	hypothetical protein	-
CT_646	-	741318..742697 (+)	1380	NP_220164.1	hypothetical protein	-
CT_647	-	742697..743275 (+)	579	NP_220165.1	hypothetical protein	-
CT_648	-	743266..744540 (+)	1275	NP_220166.1	hypothetical protein	-
CT_649	ygfA	744543..745079 (+)	537	NP_220167.1	5-formyltetrahydrofolate cyclo-ligase	-
CT_650	recA	745340..746398 (+)	1059	NP_220168.1	recombinase RecA	Machinery gene
CT_651	-	746684..748510 (+)	1827	NP_220169.1	hypothetical protein	-
CT_652	recD_2	748507..749997 (+)	1491	NP_220170.1	exodeoxyribonuclease V subunit alpha	-
CT_652.1	-	750063..750242 (+)	180	NP_220171.1	hypothetical protein	-
CT_653	yhbG	750343..751062 (-)	720	NP_220172.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37830.34 Da
• Isoelectric Point: 7.3744

>NTDB_id=20413 CT_650 NP_220168.1 745340..746398(+) (recA) [Chlamydia trachomatis D/UW-3/CX]
MSVPDRKRALEAAIAYIEKQFGAGSIMSLGKHSSAHEISTIKTGALSLDLALGIGGVPKGRIVEIFGPESSGKTTLATHI
VANAQKMGGVAAYIDAEHALDPNYAALIGANINDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAALVPKSELEGEI
GDVHVGLQARMMSQALRKLTATLARTNTCAIFINQIREKIGVSFGNPETTTGGRALKFYSSIRIDIRRIGSIKGGENFDI
GNRIKVKVAKNKLAPPFRTAEFDILFNEGISSAGCIIDLAVEKNIIDKKGSWFNYQDRKLGQGREAVREELKRNKELFHE
LERRIYESVQASQVPAAACVDAESREVAEAAK

Nucleotide

• Length: 1059 bp

>NTDB_id=20413 CT_650 NP_220168.1 745340..746398(+) (recA) [Chlamydia trachomatis D/UW-3/CX]
ATGAGCGTTCCCGACCGAAAAAGGGCTTTGGAAGCGGCCATTGCTTATATCGAAAAGCAATTTGGCGCAGGATCTATCAT
GAGTTTAGGAAAGCATTCTTCAGCTCATGAGATATCAACTATTAAAACAGGTGCATTGTCGTTGGATTTAGCCTTAGGAA
TAGGCGGGGTTCCTAAAGGAAGAATTGTAGAGATTTTTGGGCCAGAGTCTTCAGGGAAAACAACTCTAGCGACGCATATA
GTGGCCAATGCTCAAAAGATGGGCGGGGTAGCAGCTTATATCGATGCCGAGCACGCTTTGGATCCTAATTATGCTGCGCT
TATTGGAGCAAATATTAATGATTTAATGATTTCTCAGCCTGACTGTGGAGAGGATGCTTTGAGTATTGCAGAGCTCTTAG
CACGTTCTGGAGCTGTCGATGTGATTGTGATTGACTCGGTAGCAGCATTGGTTCCAAAGAGCGAGTTAGAAGGGGAAATT
GGAGATGTCCATGTTGGGTTGCAGGCTCGCATGATGTCGCAGGCTTTACGCAAATTGACTGCAACCTTAGCACGAACAAA
TACTTGTGCCATTTTCATTAACCAGATTCGGGAGAAAATAGGTGTGAGTTTTGGTAATCCAGAGACTACGACTGGAGGAC
GTGCGTTGAAGTTTTATTCTTCGATTCGTATCGATATTCGTCGTATTGGCTCTATAAAGGGAGGAGAAAATTTCGATATA
GGGAATCGTATCAAGGTGAAAGTAGCGAAAAATAAATTAGCTCCTCCATTCCGAACGGCAGAATTTGATATCTTATTTAA
TGAAGGGATTTCTTCTGCAGGATGTATTATCGATCTCGCTGTCGAAAAAAACATTATCGATAAGAAAGGATCATGGTTCA
ACTACCAGGATCGTAAGTTAGGTCAAGGTCGAGAAGCGGTTCGAGAGGAGTTGAAAAGGAACAAAGAGTTGTTCCACGAG
TTGGAACGCCGTATTTATGAGTCTGTACAGGCTTCACAAGTCCCAGCAGCAGCTTGCGTGGATGCAGAGTCTCGCGAGGT
AGCAGAGGCTGCGAAATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-271)

3D structure

• AlphaFold DB: P0CD80

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	59.697	93.75	0.56
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	94.034	0.557
recA	Bacillus subtilis subsp. subtilis str. 168	60.681	91.761	0.557
recA	Helicobacter pylori 26695	59.091	93.75	0.554
recA	Helicobacter pylori strain NCTC11637	58.788	93.75	0.551
recA	Neisseria gonorrhoeae strain FA1090	60.125	91.193	0.548
recA	Neisseria gonorrhoeae MS11	60.125	91.193	0.548
recA	Neisseria gonorrhoeae MS11	60.125	91.193	0.548
recA	Streptococcus mitis NCTC 12261	54.52	100	0.548
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.202	92.614	0.548
recA	Glaesserella parasuis strain SC1401	59.259	92.045	0.545
recA	Latilactobacillus sakei subsp. sakei 23K	55.331	98.58	0.545
recA	Streptococcus mitis SK321	54.598	98.864	0.54
recA	Lactococcus lactis subsp. cremoris KW2	58.282	92.614	0.54
recA	Pseudomonas stutzeri DSM 10701	58.567	91.193	0.534
recA	Vibrio cholerae strain A1552	57.895	91.761	0.531
recA	Vibrio cholerae O1 biovar El Tor strain E7946	57.895	91.761	0.531
recA	Acinetobacter baylyi ADP1	57.231	92.33	0.528
recA	Streptococcus mutans UA159	57.099	92.045	0.526
recA	Streptococcus pyogenes NZ131	56.79	92.045	0.523
recA	Acinetobacter baumannii D1279779	54.277	96.307	0.523
recA	Streptococcus pneumoniae TIGR4	56.173	92.045	0.517
recA	Streptococcus pneumoniae Rx1	56.173	92.045	0.517
recA	Streptococcus pneumoniae D39	56.173	92.045	0.517
recA	Streptococcus pneumoniae R6	56.173	92.045	0.517
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	54.434	92.898	0.506