Detailed information
Bioinformatically predicted
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | CT_298 | Genome accession | NC_000117 |
| Coordinates | 331368..332732 (+) | Length | 454 a.a. |
| NCBI ID | NP_219803.1 | Uniprot ID | O84300 |
| Organism | Chlamydia trachomatis D/UW-3/CX | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 326368..337732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CT_293 | accD | 326430..327356 (-) | 927 | NP_219798.1 | acetyl-CoA carboxylase carboxyltransferase subunit beta | - |
| CT_294 | sodM | 327428..328048 (-) | 621 | NP_219799.1 | superoxide dismutase | - |
| CT_295 | mrsA_1 | 328180..329961 (-) | 1782 | NP_219800.1 | phosphoglucomutase | - |
| CT_296 | - | 330113..330580 (-) | 468 | NP_219801.1 | hypothetical protein | - |
| CT_297 | rnc | 330689..331384 (+) | 696 | NP_219802.1 | ribonuclease III | - |
| CT_298 | radA | 331368..332732 (+) | 1365 | NP_219803.1 | DNA repair protein RadA | Machinery gene |
| CT_299 | hemC | 332710..333435 (+) | 726 | NP_219804.1 | porphobilinogen deaminase | - |
| CT_300 | - | 333828..334175 (+) | 348 | NP_219805.1 | hypothetical protein | - |
| CT_301 | pknD | 334228..337032 (-) | 2805 | NP_219806.1 | serine/threonine-protein kinase | - |
Sequence
Protein
Download Length: 454 a.a. Molecular weight: 49783.25 Da Isoelectric Point: 7.5070
>NTDB_id=20411 CT_298 NP_219803.1 331368..332732(+) (radA) [Chlamydia trachomatis D/UW-3/CX]
MTTKIKTQWTCTECGTHSPKWLGQCSGCLQWNTLVEERTAPKLNTSSYSSSSSIPIPLNNVEFQEEIRIHTQAQGWNRLL
GGGTVRGSLALLGGEPGIGKSTLLLQISSQFAAAGHKVLYVCGEESVSQTSLRAQRLQISSNNIFLFPETNLEDIKQQID
NIAPDILVIDSIQIIFSPSLSSAPGSVAQVRETTAELMHIAKQKQITTFIIGHVTKSGEIAGPRILEHLVDTVLYFEGNA
HANYRMIRSVKNRFGPTNELLILSMHTDGLREVENPSGLFLQEKIVETTGSTIIPIVEGSETLLIEVQALVSSSPFSNPV
RKTSGFDPNRFSLLLAVLEKRANVKLYTSDVFLSIAGGLKITQPSADLGAVLSVVSSLYNRYLPKNYTYTGEIGLGGEIR
HVSHMEHRIKESIIMGFKGIVMPFGQIKGLPKEFLDQIDIIGVKTIKDAVRLLQ
MTTKIKTQWTCTECGTHSPKWLGQCSGCLQWNTLVEERTAPKLNTSSYSSSSSIPIPLNNVEFQEEIRIHTQAQGWNRLL
GGGTVRGSLALLGGEPGIGKSTLLLQISSQFAAAGHKVLYVCGEESVSQTSLRAQRLQISSNNIFLFPETNLEDIKQQID
NIAPDILVIDSIQIIFSPSLSSAPGSVAQVRETTAELMHIAKQKQITTFIIGHVTKSGEIAGPRILEHLVDTVLYFEGNA
HANYRMIRSVKNRFGPTNELLILSMHTDGLREVENPSGLFLQEKIVETTGSTIIPIVEGSETLLIEVQALVSSSPFSNPV
RKTSGFDPNRFSLLLAVLEKRANVKLYTSDVFLSIAGGLKITQPSADLGAVLSVVSSLYNRYLPKNYTYTGEIGLGGEIR
HVSHMEHRIKESIIMGFKGIVMPFGQIKGLPKEFLDQIDIIGVKTIKDAVRLLQ
Nucleotide
Download Length: 1365 bp
>NTDB_id=20411 CT_298 NP_219803.1 331368..332732(+) (radA) [Chlamydia trachomatis D/UW-3/CX]
ATGACAACAAAAATTAAAACACAGTGGACGTGTACAGAATGTGGCACACATTCTCCAAAATGGTTGGGACAATGTTCTGG
ATGTCTCCAGTGGAATACACTAGTCGAAGAAAGAACAGCTCCTAAACTAAACACATCTTCTTACTCCTCTAGCTCTTCTA
TTCCCATACCACTAAACAATGTGGAATTTCAGGAAGAAATACGAATTCATACCCAAGCTCAAGGCTGGAATCGCCTTCTA
GGAGGAGGAACGGTCCGAGGTAGCCTCGCTCTATTGGGAGGAGAGCCTGGCATAGGAAAGTCTACTTTACTACTTCAAAT
TTCCTCACAATTCGCGGCAGCTGGTCATAAAGTGTTGTACGTTTGCGGAGAAGAATCCGTGTCCCAAACTTCATTACGAG
CCCAACGCCTGCAAATCTCTAGCAACAATATTTTCCTATTCCCAGAAACAAATCTTGAAGACATCAAACAACAGATTGAT
AACATTGCTCCAGACATATTAGTTATCGACTCTATCCAGATCATTTTTTCTCCATCCTTAAGCTCTGCTCCAGGATCGGT
TGCTCAAGTGAGAGAAACGACCGCAGAGCTCATGCATATAGCAAAACAAAAACAGATCACAACCTTTATTATTGGACATG
TCACTAAATCTGGAGAAATCGCTGGCCCACGTATCCTAGAACACTTAGTAGACACTGTTCTCTATTTTGAAGGTAATGCG
CATGCTAATTACCGTATGATTCGCTCTGTTAAGAATCGTTTCGGCCCAACCAATGAATTATTAATTTTATCCATGCATAC
AGATGGATTACGCGAAGTAGAAAATCCGTCAGGTCTCTTTCTACAAGAAAAAATTGTAGAAACTACAGGCTCTACCATTA
TCCCTATTGTAGAAGGCTCTGAAACTCTTCTTATAGAAGTTCAGGCTCTCGTTTCTTCATCCCCATTTTCTAATCCTGTA
CGAAAAACATCCGGATTTGATCCAAACCGATTTTCTTTACTCTTAGCTGTTTTAGAAAAAAGAGCGAATGTTAAATTATA
TACATCCGATGTCTTCCTTTCTATCGCTGGAGGCTTGAAAATCACACAACCTTCGGCAGACTTAGGAGCGGTGTTATCGG
TGGTGTCTTCCCTATATAACCGCTATTTACCTAAAAATTATACCTATACTGGAGAGATCGGCCTAGGAGGAGAAATTCGT
CACGTTTCACACATGGAACACCGCATAAAAGAAAGCATTATTATGGGGTTTAAAGGTATCGTGATGCCTTTTGGGCAGAT
AAAAGGCTTACCTAAAGAATTTCTGGATCAAATTGATATTATTGGAGTAAAAACAATTAAAGATGCTGTCCGCTTACTAC
AATGA
ATGACAACAAAAATTAAAACACAGTGGACGTGTACAGAATGTGGCACACATTCTCCAAAATGGTTGGGACAATGTTCTGG
ATGTCTCCAGTGGAATACACTAGTCGAAGAAAGAACAGCTCCTAAACTAAACACATCTTCTTACTCCTCTAGCTCTTCTA
TTCCCATACCACTAAACAATGTGGAATTTCAGGAAGAAATACGAATTCATACCCAAGCTCAAGGCTGGAATCGCCTTCTA
GGAGGAGGAACGGTCCGAGGTAGCCTCGCTCTATTGGGAGGAGAGCCTGGCATAGGAAAGTCTACTTTACTACTTCAAAT
TTCCTCACAATTCGCGGCAGCTGGTCATAAAGTGTTGTACGTTTGCGGAGAAGAATCCGTGTCCCAAACTTCATTACGAG
CCCAACGCCTGCAAATCTCTAGCAACAATATTTTCCTATTCCCAGAAACAAATCTTGAAGACATCAAACAACAGATTGAT
AACATTGCTCCAGACATATTAGTTATCGACTCTATCCAGATCATTTTTTCTCCATCCTTAAGCTCTGCTCCAGGATCGGT
TGCTCAAGTGAGAGAAACGACCGCAGAGCTCATGCATATAGCAAAACAAAAACAGATCACAACCTTTATTATTGGACATG
TCACTAAATCTGGAGAAATCGCTGGCCCACGTATCCTAGAACACTTAGTAGACACTGTTCTCTATTTTGAAGGTAATGCG
CATGCTAATTACCGTATGATTCGCTCTGTTAAGAATCGTTTCGGCCCAACCAATGAATTATTAATTTTATCCATGCATAC
AGATGGATTACGCGAAGTAGAAAATCCGTCAGGTCTCTTTCTACAAGAAAAAATTGTAGAAACTACAGGCTCTACCATTA
TCCCTATTGTAGAAGGCTCTGAAACTCTTCTTATAGAAGTTCAGGCTCTCGTTTCTTCATCCCCATTTTCTAATCCTGTA
CGAAAAACATCCGGATTTGATCCAAACCGATTTTCTTTACTCTTAGCTGTTTTAGAAAAAAGAGCGAATGTTAAATTATA
TACATCCGATGTCTTCCTTTCTATCGCTGGAGGCTTGAAAATCACACAACCTTCGGCAGACTTAGGAGCGGTGTTATCGG
TGGTGTCTTCCCTATATAACCGCTATTTACCTAAAAATTATACCTATACTGGAGAGATCGGCCTAGGAGGAGAAATTCGT
CACGTTTCACACATGGAACACCGCATAAAAGAAAGCATTATTATGGGGTTTAAAGGTATCGTGATGCCTTTTGGGCAGAT
AAAAGGCTTACCTAAAGAATTTCTGGATCAAATTGATATTATTGGAGTAAAAACAATTAAAGATGCTGTCCGCTTACTAC
AATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
48.904 |
100 |
0.491 |
| radA | Streptococcus pneumoniae Rx1 |
47.124 |
99.559 |
0.469 |
| radA | Streptococcus pneumoniae D39 |
47.124 |
99.559 |
0.469 |
| radA | Streptococcus pneumoniae R6 |
47.124 |
99.559 |
0.469 |
| radA | Streptococcus pneumoniae TIGR4 |
47.124 |
99.559 |
0.469 |
| radA | Streptococcus mitis NCTC 12261 |
46.903 |
99.559 |
0.467 |
| radA | Streptococcus mitis SK321 |
46.444 |
99.119 |
0.46 |